KEGG   Methanosarcina siciliae T4/M: MSSIT_0080
Entry
MSSIT_0080        CDS       T03865                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
msw  Methanosarcina siciliae T4/M
Pathway
msw03030  DNA replication
msw03410  Base excision repair
msw03420  Nucleotide excision repair
msw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSSIT_0080
   03410 Base excision repair
    MSSIT_0080
   03420 Nucleotide excision repair
    MSSIT_0080
   03430 Mismatch repair
    MSSIT_0080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msw03032]
    MSSIT_0080
   03400 DNA repair and recombination proteins [BR:msw03400]
    MSSIT_0080
DNA replication proteins [BR:msw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSSIT_0080
DNA repair and recombination proteins [BR:msw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSSIT_0080
   MMR (mismatch excision repair)
    Other MMR factors
     MSSIT_0080
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSSIT_0080
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AKB26799
UniProt: A0A0E3P0Q9
Position
complement(105000..105737)
AA seq 245 aa
MFKAAINAELLKDAIASLAVIVDEVRFKIKPEGISVKAVDPANVAMGIFELGSSAFEEYS
ADECEIGLDLNKITDLLGIADRNDTVRMELEEESNKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSGDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGRDFPILIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgcctcactggctgta
attgtagatgaggttaggttcaaaattaaacccgaagggatttcggtaaaagcagttgac
cctgccaacgttgcaatgggaatttttgaacttgggtcatcggcttttgaggaatacagc
gctgatgagtgtgagataggacttgacctgaacaagattaccgaccttctgggaattgca
gacaggaacgatacagtcaggatggaacttgaagaagaaagcaataaactcctgatcgat
gtaggagggctgtcctatactctttccctgctggacccttcaacaatccgtgcggaaccc
agagttccccagctcgagctgcctgccaaagttgtcctgaacggtgcagaccttaggcgt
gccgtaaaagccgcagaaaagataagcgaccatatgctcatgggggtctccggagatact
ttctatatggaagctaagggcgatacagatcaggtccgcctggaaatgggcagagaccag
ttaatcgacctgaaagcaggtgaagcctgttccctcttctccctggactacctgacagat
atagtcaagcccacaaacaaggtaaatgaggttactctctctcttggcagggatttccct
atcctgattgactttgaaattgcaaacggtgcaggtagaatatcttacctcctggcccct
agaatagaatcagactaa

DBGET integrated database retrieval system