KEGG   Marinobacter similis: AU14_00425
Entry
AU14_00425        CDS       T03594                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
msx  Marinobacter similis
Pathway
msx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AU14_00425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msx03019]
    AU14_00425
Enzymes [BR:msx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AU14_00425
Messenger RNA biogenesis [BR:msx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AU14_00425
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UvrA_inter
Other DBs
NCBI-ProteinID: AHI27695
UniProt: W5YFC4
Position
87366..88646
AA seq 426 aa
MTSEPKHTGDLRFQDLNLDQKLQDAISAIGFEYCTPIQAETLPWTLACEDLIGQAQTGTG
KTAAFLITAIQALLETPIPKTDRFASEPRVLALAPTRELAMQIAKDAEQLCEHTGHNVVT
VVGGMNYDKQRDQLQNEVVDILVATPGRLIDFLGSQDVFLDQLDILILDEADRMLDMGFI
PDVKRIIRKCTAKENRQTLLFSATFNQDVLNLASMWTQNAEFVEIEPEQKTAERVEQSVY
LVGEDEKLPVLVNYLKRPEVEKAIVFANRRDQCRDLEEDLRNQGVKVSLMSGEIAQNKRL
KTLDQFKKGSIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGKHGVS
VSFAGEDDSFALPAIETYISQKLNTTVPDEVLMTPMENPPITRKRGRRPQSGRGGPGGRN
QRQRRN
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgacatctgaacccaagcacactggcgacctccggttccaggacctcaatctggaccag
aagcttcaggacgccatctcggcgattggctttgaatactgcacaccgatccaggctgaa
accctgccatggaccctggcctgcgaagatctgatcggccaggcccagactggcaccggc
aagaccgcagcctttctgattaccgctatccaggcgctgttggaaaccccgattccgaaa
accgaccgtttcgcttccgagccccgggtactggcgctggcgcccacccgcgaactggcc
atgcagattgccaaggatgccgaacagttgtgcgagcacaccggccacaatgtggtcacg
gttgtcggtggtatgaactacgacaagcagcgggatcagttgcagaacgaagtagtggat
atcctggtggcgacaccgggccgtctgatcgatttcctcggctcccaggacgtgttcctg
gaccagctcgatattttgatcctggacgaagctgaccgcatgctggacatgggtttcatc
ccggacgtcaagcggatcatccgcaagtgcacggccaaggaaaaccggcagaccctgctg
ttcagcgcaacctttaaccaggacgtgttgaatcttgcctccatgtggacccagaacgct
gagtttgtggaaattgagcccgagcagaaaactgccgagcgtgttgagcaatcggtttac
ctggtgggtgaggatgagaagctgccggtgctggtgaattacctcaagcgcccggaagtg
gaaaaggccattgtctttgccaaccgacgggatcagtgtcgggacttggaagaagacctg
cgtaaccagggcgttaaagtatcgttgatgtcaggtgaaatcgcccaaaacaagcgattg
aagaccctggaccagttcaaaaagggcagtattcaggtcctggtggccaccgatgtggcc
ggtcgtggtatccacgtcaacggtgtgactcacgttttcaactacaatcttcccgataat
gctgaagattatgtgcatcgcattggccgtaccgggcgtgcgggtaagcacggggtgtcg
gtcagttttgcaggggaggacgattcctttgccctgccggcgatcgaaacctatatcagc
cagaaactgaataccacagtgccggatgaggtattgatgacgcccatggagaacccgccc
attacccggaagcggggtcggcgtccccagagcggtcggggtggtcccggtggaagaaat
cagcgccagcgaaggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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