KEGG   Marinobacter similis: AU14_17925
Entry
AU14_17925        CDS       T03594                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
msx  Marinobacter similis
Pathway
msx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AU14_17925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msx03019]
    AU14_17925
Messenger RNA biogenesis [BR:msx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AU14_17925
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 P-loop_SecA CMS1 HEM4 AAA_22
Other DBs
NCBI-ProteinID: AHI29753
UniProt: W5YTE8
Position
3746916..3748238
AA seq 440 aa
MSFSSLGLSEQLVRATSDQGYDTPSPIQAQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLL
QRLAEKPRTGKGPRALILAPTRELAAQVHDSVNLYSKYIPTKAAVVFGGVKINPQMMKLR
KGLDVLVATPGRLMDLYQQNAVRFDEVEILVLDEADRMLDMGFIRDIRKILALLPAKRQN
LLFSATFSNEIRTLAQGLLDNPVQVEVAARNTAAESIKQSVYPVDQSQKTALLSKLVRDN
AWEQVLVFTRTKHGANRLTQKLERDGITAAAIHGNKSQGARTRALAEFKQGDIRVLVATD
IAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGIEKL
IKKQLPRKQVDGFEPTNNLPLKPKAKADPSKARGRNGNGGGNGKPGGKPRSFGAKPGGRS
GGRSQNGGGGQRSRGARQDA
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgagtttttcttcactcggtctgtccgagcagctggtccgtgccacgtccgatcagggc
tacgatactccttccccgattcaggcccaggccattccagccgtactgtccggcaaggac
gtgatggctgctgcccagaccggaaccggcaaaaccgccggctttaccctgccattgctg
cagcggttggctgaaaagccccgcaccggcaagggcccgcgcgcactgatcctggccccg
acccgggagctggcggcgcaggtgcacgacagcgtaaatctttacagcaagtacattccg
accaaggccgcggtggtcttcggtggcgtgaaaatcaatccccagatgatgaagctgcgt
aagggtctggacgttctggtggccactccaggtcgcctgatggacctttaccagcagaac
gccgtgcgtttcgacgaagtcgagattctggttctggacgaagccgaccgcatgctcgac
atgggcttcatccgcgacatccgcaagatccttgcgcttttaccggccaagcgtcagaac
ctgttgttctccgcgaccttctccaacgagattcgtaccctggctcaaggcctgctggac
aatcccgttcaggtagaagtggcggctcgtaacaccgcggcggagagcatcaaacagtca
gtttatcccgtcgatcagagccagaagactgccttgctgagcaagctggtgcgggacaat
gcgtgggagcaagtgctggtctttacccgcaccaagcacggcgcgaaccgcctgacccag
aagctggagcgcgatggcatcaccgccgcggcgatccatggcaacaaatcccagggtgcc
cgcacccgcgcactggctgagttcaagcagggtgacatccgggttctggtggcgactgat
atcgccgcccgtggcctggacatcaaacagctaccgcaggtagtgaactttgagctgccg
aacgtgccggaagattacgtgcaccggattggccgcaccggccgtgccggcgagagtggt
catgcgttgtcgctggtcagtgccgacgaaggcaagatgttggcgggtatcgaaaaactg
atcaagaagcagttgccacgcaagcaggtggatggcttcgagccgaccaacaatctgccg
ctgaagccgaaggccaaagccgacccgagcaaggcgcgtggccgcaatggcaatggtggc
ggtaacggcaagccaggtggcaaaccgcgcagtttcggcgccaagccgggtggtcgtagc
ggtggtcgcagtcagaacggtggtggcggtcagcgcagccgcggagcacgtcaggacgcc
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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