KEGG   Methanosarcina siciliae HI350: MSSIH_2238
Entry
MSSIH_2238        CDS       T03864                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
msz  Methanosarcina siciliae HI350
Pathway
msz03030  DNA replication
Brite
KEGG Orthology (KO) [BR:msz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSSIH_2238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msz03032]
    MSSIH_2238
DNA replication proteins [BR:msz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSSIH_2238
SSDB
Motif
Pfam: AAA RuvB_N Rad17 KinB_sensor AAA_assoc_2 AAA_22 AAA_16 AAA_14 IPT nSTAND3 AAA_6 AAA_30 RNA_helicase DUF1798 NACHT AAA_24 DUF815 TsaE AAA_25 AAA_5 AAA_7 AAA_28
Other DBs
NCBI-ProteinID: AKB32928
UniProt: A0A0E3PG50
Position
2807012..2808721
AA seq 569 aa
MAIEWAEKYRPQTLEDVVGNKKAVRDFRAWAEEWQSGIPETRAVILYGPAGIGKTSSAHA
LARDMEWDVIELNASDQRTAGVIEKIAGSAASMNSLFGSKRLIILDEADNIHGTADRGGM
RAISGIIKGTLQPIVLIANDIYGLTPTIRNLCLEIKFGSVQSRSMVPALKKVCKAEEVNC
SQEALLQIAENAGGDFRSAMNDLQAAANGKEKLEVEDIGTAERDVKENIFKAMQKIFKST
DCRKALESAYGLDESPEDLVHWIDENLPIQYARKDGNLEDIRTGFGYISKADLYLGRVKK
RQNYRMWRYASMLMVCGAALSKTKPYPGFIKYQQPSLWKRLGQTRSKRDMRDNIASKIGE
HSFESMHYSRNNLLGFYSRMLKDEESAVEVTANLRLELEELMYLTGSTKASKKLQKIYDE
AQKLLEEGKDETADPDFFKAPMPAVDNKQKTLNIGFNSLLETSEKKVNSEKKENYEEKEN
SGKLPVDDSKPAEKNLFSFSTPLPEKKALSESVEQKTSSKPSKKGNPSNNEPFKQKILDK
VSPSESVQDSTGDGAKKAEPKNQKTLFDF
NT seq 1710 nt   +upstreamnt  +downstreamnt
ttggcaatcgaatgggctgaaaaataccgaccccagacccttgaagatgtcgtggggaac
aagaaggcagtgcgggatttcagggcatgggctgaggaatggcagtccgggattcctgag
acgagggcagtgattctctacgggcctgcagggataggaaaaacttcaagtgctcatgct
ctggccagggatatggagtgggatgttatcgaactcaatgcgagcgaccagaggacggca
ggggttattgagaagattgctggctctgcagcgtcaatgaatagtctttttgggagcaag
cggctcattattcttgatgaggcggacaacatccacgggactgcagatcggggcgggatg
agggcgatttccggaatcataaaaggaacacttcagccgattgtgcttattgcaaatgat
atttacgggttgacacccacaatccggaacctctgcctggaaataaagttcgggtccgtg
cagagccgttcgatggttcctgctttgaaaaaggtctgtaaagcggaggaagtcaattgc
agtcaggaagctctcctgcagattgcagaaaatgcgggaggagacttcaggagtgcaatg
aatgaccttcaggctgcagcgaacggaaaggaaaagctcgaagttgaagatatagggact
gcggaaagggatgtaaaagagaacatctttaaggcgatgcagaagatttttaaaagcact
gactgtagaaaggcgcttgaatcggcatacgggcttgatgaaagtcctgaagatctcgta
cactggattgatgaaaatttgcccatccagtatgcccgcaaggacggaaacctcgaagat
ataaggacgggatttggatacatttcaaaagcagacctgtatctgggacgtgtaaagaag
cgccagaattacaggatgtggagatatgccagcatgctcatggtctgcggggctgccctt
tcaaagacaaagccgtatccgggctttatcaaataccagcagccttcactctggaaaagg
ctcggacagacccgttcgaaacgggacatgcgggacaatattgcttcgaaaatcggggaa
cacagctttgagtcgatgcactactccagaaacaacctcctggggttttactcccgtatg
ctgaaggatgaggaatccgcagtggaagttaccgcaaatctcagacttgagcttgaagag
ttgatgtatcttacaggaagtacaaaggcaagcaaaaaactgcagaaaatttatgacgag
gcgcagaaacttctcgaagagggtaaggatgaaactgcagatccggatttttttaaagct
cctatgcctgcagtggacaacaagcagaaaacccttaacataggatttaactccctgctt
gagacctccgaaaaaaaagtaaattcggagaaaaaagaaaactatgaggaaaaagagaat
tctgggaaactaccagtggacgattcgaaacctgcagaaaagaatttattttctttttcc
acacctctgccggaaaagaaagccctttctgaatctgtagagcagaaaacctcctccaag
ccttcgaaaaaggggaatccgtctaacaatgaacctttcaaacaaaagatattggataag
gtttcaccttccgaaagtgtgcaggatagtacaggagatggggcaaagaaagcagagcct
aaaaaccagaaaacactctttgacttttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (30)   

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