KEGG   Mycobacterium tuberculosis CCDC5079: CCDC5079_0006
Entry
CCDC5079_0006     CDS       T01991                                 
Name
(GenBank) DNA gyrase subunit B gyrB
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
mte  Mycobacterium tuberculosis CCDC5079
Brite
KEGG Orthology (KO) [BR:mte00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mte03032]
    CCDC5079_0006
   03400 DNA repair and recombination proteins [BR:mte03400]
    CCDC5079_0006
Enzymes [BR:mte01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CCDC5079_0006
DNA replication proteins [BR:mte03032]
 Prokaryotic type
  DNA Topoisomerases
   CCDC5079_0006
DNA repair and recombination proteins [BR:mte03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CCDC5079_0006
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: AEJ45196
Position
5240..7267
AA seq 675 aa
MAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSES
VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
SFITRNAKDVRFLDV
NT seq 2028 nt   +upstreamnt  +downstreamnt
gtggctgcccagaaaaagaaggcccaagacgaatacggcgctgcgtctatcaccattctc
gaagggctggaggccgtccgcaaacgtcccggcatgtacattggctcgaccggtgagcgc
ggtttacaccatctcatttgggaggtggtcgacaacgcggtcgacgaggcgatggccggt
tatgcaaccacagtgaacgtagtgctgcttgaggatggcggtgtcgaggtcgccgacgac
ggccgcggcattccggtcgccacccacgcctccggcataccgaccgtcgacgtggtgatg
acacaactacatgccggcggcaagttcgactcggacgcgtatgcgatatctggtggtctg
cacggcgtcggcgtgtcggtggttaacgcgctatccacccggctcgaagtcgagatcaag
cgcgacgggtacgagtggtctcaggtttatgagaagtcggaacccctgggcctcaagcaa
ggggcgccgaccaagaagacggggtcaacggtgcggttctgggccgaccccgctgttttc
gaaaccacggaatacgacttcgaaaccgtcgcccgccggctgcaagagatggcgttcctc
aacaaggggctgaccatcaacctgaccgacgagagggtgacccaagacgaggtcgtcgac
gaagtggtcagcgacgtcgccgaggcgccgaagtcggcaagtgaacgcgcagccgaatcc
actgcaccgcacaaagttaagagccgcacctttcactatccgggtggcctggtggacttc
gtgaaacacatcaaccgcaccaagaacgcgattcatagcagcatcgtggacttttccggc
aagggcaccgggcacgaggtggagatcgcgatgcaatggaacgccgggtattcggagtcg
gtgcacaccttcgccaacaccatcaacacccacgagggcggcacccacgaagagggcttc
cgcagcgcgctgacgtcggtggtgaacaagtacgccaaggaccgcaagctactgaaggac
aaggaccccaacctcaccggtgacgatatccgggaaggcctggccgctgtgatctcggtg
aaggtcagcgaaccgcagttcgagggccagaccaagaccaagttgggcaacaccgaggtc
aaatcgtttgtgcagaaggtctgtaacgaacagctgacccactggtttgaagccaacccc
accgacgcgaaagtcgttgtgaacaaggctgtgtcctcggcgcaagcccgtatcgcggca
cgtaaggcacgagagttggtgcggcgtaagagcgccaccgacatcggtggattgcccggc
aagctggccgattgccgttccacggatccgcgcaagtccgaactgtatgtcgtagaaggt
gactcggccggcggttctgcaaaaagcggtcgcgattcgatgttccaggcgatacttccg
ctgcgcggcaagatcatcaatgtggagaaagcgcgcatcgaccgggtgctaaagaacacc
gaagttcaggcgatcatcacggcgctgggcaccgggatccacgacgagttcgatatcggc
aagctgcgctaccacaagatcgtgctgatggccgacgccgatgttgacggccaacatatt
tccacgctgttgttgacgttgttgttccggttcatgcggccgctcatcgagaacgggcat
gtgtttttggcacaaccgccgctgtacaaactcaagtggcagcgcagtgacccggaattc
gcatactccgaccgcgagcgcgacggtctgctggaggcggggctgaaggccgggaagaag
atcaacaaggaagacggcattcagcggtacaagggtctaggtgaaatggacgctaaggag
ttgtgggagaccaccatggatccctcggttcgtgtgttgcgtcaagtgacgctggacgac
gccgccgccgccgacgagttgttctccatcctgatgggcgaggacgtcgacgcgcggcgc
agctttatcacccgcaacgccaaggatgttcggttcctggatgtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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