KEGG   Mycolicibacter terrae: 4434518_02687
Entry
4434518_02687     CDS       T05465                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mter  Mycolicibacter terrae
Pathway
mter03030  DNA replication
mter03410  Base excision repair
mter03420  Nucleotide excision repair
mter03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mter00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    4434518_02687 (ligA)
   03410 Base excision repair
    4434518_02687 (ligA)
   03420 Nucleotide excision repair
    4434518_02687 (ligA)
   03430 Mismatch repair
    4434518_02687 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mter03032]
    4434518_02687 (ligA)
   03400 DNA repair and recombination proteins [BR:mter03400]
    4434518_02687 (ligA)
Enzymes [BR:mter01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     4434518_02687 (ligA)
DNA replication proteins [BR:mter03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     4434518_02687 (ligA)
DNA repair and recombination proteins [BR:mter03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     4434518_02687 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     4434518_02687 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     4434518_02687 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      4434518_02687 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH BRCT_2 Auto_anti-p27 Mu-like_Com
Other DBs
NCBI-ProteinID: SNV82357
UniProt: A0A240AG08
Position
1:complement(2859552..2861609)
AA seq 685 aa
MTPDLRRQWHDLAEEVREHQFRYYVKDAPIITDGEFDELFNALLALEDAYPELRAADSPT
QLVGGAGFTTDFAPAEHLERMLSLEDVFSPDELTAWAGRVAGEIGGDTTYLCELKVDGVA
LGLVYRDGRLISGATRGDGRVGEDVTLNARTIADVPEFLTADSEFPIPAVLEVRGEVYFR
LEDFETLNAGLVAEGKAPFANPRNSAAGSLRQKNPAITARRKLRMVCHGLGYTEGFNPAT
LHEAYTAMKAWGLPVSSHTARVDGMAAVAERITYWGEHRHDVEHEIDGVVVKVDDRALQR
RLGATSRVPRWAVAYKYPPEEAQTTLVDIRVSVGRTGRVTPFAYMTPVKVAGSTVSLATL
HNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGTEREFVMPTHCPECGTLLARA
KEADVDIRCPNSRSCPAQLRERVFHVAGRGAFDIEALGYEAATALLSAGVISDEGDLFTL
TEDDLLRTELFTTKGGALSKNGRQLLTNLDKAKSQPLWRVLVALSIRHVGPTAARALATE
FGSLEAITAASTEQLAAVEGVGPTIAAAVTEWFDVDWHRAIVDKWRAAGVRMADERDESI
ERTLEGLSIVVTGSLTGFSRDEAKEAIIARGGRAAGSVSKKTAYVVAGDAPGSKYDKAVE
LGVPVLDEDGFVRLLAEGPADDTTD
NT seq 2058 nt   +upstreamnt  +downstreamnt
gtgaccccggatctccggcggcagtggcacgacctggccgaagaggtgcgcgaacaccag
ttccgctactacgtcaaagacgcgccgatcatcaccgacggcgaattcgacgagctgttc
aacgcactgctcgcactggaggacgcctacccggaactgcgggccgccgactcgccgacc
cagctggtgggcggggccggcttcaccaccgacttcgcaccggcagagcacctggaacgg
atgctgtcgctggaagacgtgttctcacccgatgagctgaccgcctgggcgggccgggtc
gccggtgagatcggcggcgacaccacctacctgtgcgagctcaaggtcgacggggtggcg
ctcggactggtgtatcgcgacggccggttgatcagcggcgccacccgcggtgacggccgg
gtcggcgaggatgtgacgctgaacgcgcggactatcgccgacgtccccgaattcctcacc
gccgacagcgaattcccgattccggcggtgctggaggtacgcggcgaggtgtacttccgg
ctggaggacttcgaaaccctcaacgccgggctggtcgccgagggcaaggcgccgttcgcc
aacccccgtaacagcgcggccggatcactgcgacagaagaacccggccatcaccgcccgg
cgcaaactgcggatggtctgccacggcctcggctacaccgagggattcaaccccgcgacc
ctgcacgaggcctacaccgcgatgaaggcctggggactgccggtctcatcgcacaccgcc
cgggtcgacggtatggccgcggtggccgaacgcatcacctactggggcgagcaccgccac
gatgtcgaacacgaaatcgacggtgtggtcgtcaaagtcgacgaccgggcactgcagcgc
cggctcggcgccacctcgcgggtgccccgctgggcggtggcctacaaatacccgccggag
gaggcgcagaccacgctggtcgacatccgggtcagtgtcgggcgcaccggccgggtcacc
ccgttcgcctacatgaccccggtcaaggtggccggctccacggtgagcctggccaccttg
cacaatgcctcggaggtcaagcgcaagggcgtgctgatcggtgacaccgtggtgatccgc
aaggccggtgacgtgatccccgaggtgctcggacccgtggtcgacctgcgtgacggcacc
gaacgcgagttcgtcatgccgacccactgcccggaatgcggaaccctgctggcgcgggcc
aaggaagccgacgtcgacatccgctgtcccaattcgcggtcctgcccggcccagctgcgc
gagcgggtgttccacgttgccggccgcggtgccttcgacatcgaggccctgggctacgaa
gcggcgaccgcgctgttgagcgccggcgtcatctccgacgagggcgatctgttcaccctc
accgaagacgacctgctgcgcaccgagttgttcaccaccaagggcggcgcgctgtccaag
aacggccggcaattgctgaccaacctcgacaaggccaagtcccaaccgctgtggcgggtg
ttggtggcattgtcgatccgccatgtcggcccgaccgccgcccgggcgctggcaaccgaa
ttcggcagcctggaggcgatcaccgcggcgtctaccgagcagctcgcggcggtcgagggc
gtcgggcccaccattgccgccgcggtcaccgaatggttcgacgtcgactggcaccgcgcg
atcgtcgacaagtggcgggcggccggggtgcggatggccgacgaacgcgacgagagcatc
gaacgcacgctggagggcctgagcatcgtcgtgacgggttcgctgaccggcttctcccgc
gatgaggccaaggaggcgatcatcgcgcgtggaggccgcgccgccgggtcggtgtcgaag
aagacggcctatgtcgtcgccggtgacgcgccggggtcgaagtacgacaaggccgtcgaa
ctcggggtcccggtcctcgacgaggacggtttcgtcaggctgctggccgagggcccggcg
gacgacacaacggattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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