KEGG   Mycobacterium tuberculosis F11: TBFG_10450
Entry
TBFG_10450        CDS       T00545                                 
Name
(GenBank) alternative RNA polymerase sigma factor sigK
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mtf  Mycobacterium tuberculosis F11
Brite
KEGG Orthology (KO) [BR:mtf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtf03021]
    TBFG_10450
Transcription machinery [BR:mtf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TBFG_10450
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_38 HTH_24
Other DBs
NCBI-ProteinID: ABR04793
Position
complement(537002..537565)
AA seq 187 aa
MTGPPRLSSDLDALLRRVAGHDQAAFAEFYDHTKSRVYGLVMRVLRDTGYSEETTQEIYL
EVWRNASEFDSAKGSALAWLLTMAHRRAVDRVRCEQAGNQREVRYGAANVDPASDVVADL
AIAGDERRRVTECLKALTDTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSL
RNCLDVS
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaccggaccgccacggctgagcagcgacctggacgccctgttgcgccgggtcgctggt
cacgaccaggccgcattcgccgaattctacgaccacaccaagtcgcgggtgtatggactg
gtgatgcgggtgctgcgtgataccggctacagcgaagaaaccacccaggagatctatctt
gaggtgtggcggaacgcgtcggagtttgactccgccaaaggttccgcgttggcctggctt
ttgaccatggcccaccggcgcgctgtcgaccgagtccgttgcgagcaagccggcaaccag
cgggaagtgcgctatggtgcggccaacgtcgatcccgcgagtgacgtcgtcgccgacctg
gcgatcgccggtgatgagcggcgccgggtgaccgagtgcctcaaggcgttgaccgacacg
cagcggcagtgcatcgaactggcctactacggcgggctgacgtatgtcgaagtttcgcgg
cggttagcggccaatctgtcgaccatcaaatcccgcatgcgcgacgccctgcgcagcctg
cgcaactgcctggacgtgtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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