KEGG   Microbulbifer thermotolerans: A3224_01155
Entry
A3224_01155       CDS       T04393                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mthd  Microbulbifer thermotolerans
Pathway
mthd02024  Quorum sensing
mthd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mthd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A3224_01155
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A3224_01155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mthd03019]
    A3224_01155
   03036 Chromosome and associated proteins [BR:mthd03036]
    A3224_01155
Messenger RNA biogenesis [BR:mthd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     A3224_01155
Chromosome and associated proteins [BR:mthd03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    A3224_01155
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AMX01371
UniProt: A0A143HIP9
Position
272002..272286
AA seq 94 aa
MSKGHSLQDPYLNVLRKERIPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPSRAVRVPLLNPQAQQGGEGAGGEGGGETFG
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcatagcttacaagacccttacctcaacgtattgcgcaaagagcgtatc
ccggtttccatctatttggttaacggcatcaaacttcaggggcaaatagaatctttcgat
cagtttgtggtactgctgaaaaacactgtcagccagatggtgtacaagcacgctatctcc
actgtggttccgtcccgtgcggtgcgcgtgccactgctgaacccccaggctcagcagggc
ggcgagggtgccggtggcgagggcggcggagaaactttcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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