KEGG   Microbulbifer thermotolerans: A3224_13795
Entry
A3224_13795       CDS       T04393                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mthd  Microbulbifer thermotolerans
Pathway
mthd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mthd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A3224_13795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mthd03019]
    A3224_13795
Enzymes [BR:mthd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A3224_13795
Messenger RNA biogenesis [BR:mthd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A3224_13795
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 Flavi_DEAD AAA_25
Other DBs
NCBI-ProteinID: AMX03501
UniProt: A0A143HPS8
Position
complement(3350418..3351743)
AA seq 441 aa
MLFEDLGLVREIARAVTEKGYTEPTPIQAQAIPAVMAGGDIMAAAQTGTGKTAGFTLPLL
HRLSQGERARNGRVRTLVLTPTRELAAQVFDNVQDYSKYLPLRHAVVFGGVKINPQIARL
RGGADILVATPGRLLDLHGQGAVHFDKLEALVLDEADRMLDMGFIHDIKRILKLLPAKRQ
NLLFSATFSPEIRNLAKGLVKDPLEIDVSPRNTTTETVQQKLYPVDKGRKQKLLSHLIRE
NNWYQALVFSRTKHGANRLVKQLQADDITAAAIHGNKSQNARTKALADFKSGKVQILVAT
DIAARGIDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGARGQAVSLVSADEIKQLRDIER
LIKMALPREEVAGFEPSQPLPESGGPAKGGRRRSGGKRPGDGGRGNGQRRRRNDSSQTPR
GDAQRPRRRRRPAHSSESASG
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgctatttgaagatctgggcttggtgcgggaaattgcccgcgctgtcacagagaaaggt
tatacggagccgactccgattcaggctcaggcaattcccgcggtgatggccggcggggat
attatggcggcggcgcagacaggtaccggcaagacagccggatttactctgccgctgttg
catcggttaagccagggagagcgcgcgcgcaatggccgcgtccgcaccctggtgctcacc
cccacccgcgagctggcggcgcaggtgttcgacaacgtgcaggattacagcaagtacctg
ccgctgcgccatgcagtggtttttggcggggtgaaaatcaatccgcagatcgcgcgcctg
cgcggtggcgctgatattctcgtggccactccgggccgcctgttggatctgcacggccag
ggggctgtgcattttgacaagctggaggccctggtgctggatgaggccgatcgcatgttg
gacatgggctttattcacgacatcaagcgcatcctgaaacttctgcccgccaagcgccag
aacctgctcttctccgcgaccttttcaccggaaatccgcaatcttgccaagggattggtg
aaagatccgctggagattgacgtcagcccgcgcaacaccaccacagagacggtgcaacag
aagttgtacccggtggacaaggggcgcaaacagaagctgttgagccatttgatccgcgag
aacaactggtatcaggctctggtgttcagccgcaccaagcacggcgccaaccgactggtg
aaacaattacaggcggacgatatcaccgctgccgccattcacggcaacaagagccagaat
gcgcgcactaaggcgctggcggattttaagagcggaaaggtgcaaatactggtggccacg
gatatcgctgcccgcggtatcgatatcgaccagctgccccaagtggtgaatttcgatctg
cccaatgtgccggaggattacgtgcaccgcataggccgcaccggtcgcgccggtgcccgc
ggccaggcggtatccctggtgagcgcggatgagatcaaacagctgcgggatatcgagcgg
ctgatcaagatggcgctgccgcgggaagaggtcgcgggatttgaaccgagccagccactg
ccggagtcgggcggcccggcgaaggggggcaggcgccgcagcggcggcaagaggcctggt
gatggcggtcgcggcaacggacagagacggcgccgcaacgacagtagccagactccgcgc
ggtgacgcccagcgtccccgccgccgccggcgcccggcgcacagcagcgaaagcgcatca
gggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (65)   

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