KEGG   Massilia oculi: DIR46_09555
Entry
DIR46_09555       CDS       T05448                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mtim  Massilia oculi
Pathway
mtim03030  DNA replication
mtim03410  Base excision repair
mtim03420  Nucleotide excision repair
mtim03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DIR46_09555
   03410 Base excision repair
    DIR46_09555
   03420 Nucleotide excision repair
    DIR46_09555
   03440 Homologous recombination
    DIR46_09555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtim03032]
    DIR46_09555
   03400 DNA repair and recombination proteins [BR:mtim03400]
    DIR46_09555
Enzymes [BR:mtim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DIR46_09555
DNA replication proteins [BR:mtim03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DIR46_09555
DNA repair and recombination proteins [BR:mtim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DIR46_09555
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DIR46_09555
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc GPAT_N
Other DBs
NCBI-ProteinID: AWL04659
UniProt: A0A2S2DHU9
Position
complement(2061560..2064331)
AA seq 923 aa
MDNTLLLVDGSSYLYRAYHALPDLRSPDGFPTGAMHGMVNMLRRLRADFPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPEDLGKQIEPIHEVVRYMGWPILMVDGVEADDVIGTLAVQ
ATARGMKTVVSTGDKDLAQLVNDKVMLINTMTNERMDEAGVLAKFGVPPNRIIDYLTLVG
DTVDNVPGVAKCGPKTAVKWLTLHGSLDGVIENAASIGGAVGANLQAALEWLPKGRELIT
VKTDCDLVKHVISFEETLVGRPEDAEALRDFFQRYGFKTMLRDLGGAKATDGSVRPAAGS
APGGGPLNSPEGAATLAGMPVIKGEYETILTDEQLDKWLALVDAAELTSVDTETTSLDPM
TAEMVGISLSVEVGKGAYIPVAHRYAGAPDQLSREHVLEKMRGWLENPAKPKVGQNLKYD
MHIFANHGVTLKGIAHDTLLQSYVFESHKPHDMDTMAMRHLGYTTIPYVDVCGKGAKQIC
FDQVELARATEYAGEDSDITLRLHQSMLPEVQKDKGLAYIYREIEMPTMEVLHKIERNGV
LIDSALLDVQSGELGKRMMELEQQAYEAAGGPFNLGSPKQIGEIFFGKLGLPVIKKTATG
APSTDEEVLQKLAEDYPLPKILLEHRGMSKLKSTYTDKLPKMVNPNTGRVHTNYAQAVAI
TGRLSSNEPNLQNIPVRNAEGRRIREAFIAAPGHVIVSADYSQIELRIMAHISGDAAMLK
AFADGEDIHRATAAEIFGIPPADVQSEQRRYAKVINFGLIYGMSAFGLAGNLGIERAAAA
NYIERYFARFSGVKQYMDNTRLEAKARGYVETVFGRRLWLPEINSPNGPRRAGAERAAIN
APMQGTAADLIKMAMIAVQNWIESDGLGTRMIMQVHDELVLEVPEGELELVRVKLPELMA
GVAKLNVPLLAETGVGKNWEEAH
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggacaataccctgctgctcgttgacggttccagttatctttatcgcgcctaccacgcg
ctgcccgacctgcgcagcccggacggcttcccgaccggcgccatgcacggcatggtcaat
atgttgcgccgcctgcgcgccgacttcccggccgcctacatcgcctgcgtgttcgacgcc
aagggcaagaccttccgcgacgacctgtatccggaatacaaggccacgcgcgcctcgatg
ccggaagacctgggcaagcagatcgaaccgatccacgaagtggtacgctacatgggctgg
ccgatcctgatggtcgatggggtcgaagccgatgacgtgatcggcaccctggcggtgcag
gcgacggcgcgcggcatgaagaccgtggtctcgaccggcgacaaggacctggctcaattg
gtcaacgacaaggtcatgctgatcaataccatgaccaacgagcgcatggacgaagcgggc
gtgctggccaagttcggcgtgccgccaaaccgcatcatcgactacctgaccctggtcggc
gacaccgtcgacaacgtgccgggcgtggccaagtgcggccccaagacggccgtcaaatgg
ctgaccctgcacggctcgctcgatggcgtgatcgagaacgcggccagcatcgggggcgcc
gtcggcgccaacctgcaggcggcgctggagtggctgccgaaggggcgcgaactgatcacc
gtcaagaccgactgcgacctggtcaagcacgtgatttcgttcgaggaaacgctggtcggc
cgtccggaagacgccgaggcgttgcgcgactttttccagcgttatggtttcaagaccatg
ctgcgcgacctgggcggcgccaaggcgaccgatggcagcgtgcgtccggccgccggcagc
gcgccgggcggcgggccgctcaattcgccggaaggcgcggcgaccctggccggcatgccg
gtcatcaagggcgagtacgaaaccatcctcaccgacgagcagctggataaatggctggcg
ctggtcgacgctgcggagctgacctcggtggacaccgaaaccacctcgctcgacccgatg
acggccgagatggtcggcatctcgttgtcggtcgaggtgggcaagggcgcctacatcccc
gtagcgcaccgctacgccggcgcgccggaccagctgtcgcgcgagcacgtgctggaaaag
atgcgcggctggctggaaaatccggccaagccgaaggtgggccagaacctcaagtacgat
atgcacatcttcgccaaccatggcgtgaccctgaaaggcatcgcgcacgacacgctgctg
caatcgtacgtgttcgagtcgcacaagccgcacgatatggacacgatggcgatgcgccac
ctgggctacaccacgattccctacgtggacgtgtgcggcaagggcgccaagcagatctgc
ttcgaccaggtcgagctggcgcgcgccaccgagtatgccggcgaggattcggacatcacc
ctgcgcctgcatcagagcatgctgccggaagtgcagaaggacaagggtctcgcctatatc
taccgcgagatcgagatgccgaccatggaagtgctgcacaagatcgagcgcaacggcgtg
ctgatcgacagcgcgctgctcgatgtgcagtcgggcgaactgggcaagcgcatgatggag
ctggaacagcaggcctatgaggcggcgggcggcccgttcaacctgggttcgccgaaacag
atcggcgagatcttcttcggcaagctcggcctgccggtgatcaagaagaccgccaccggc
gcgccgtcgaccgacgaagaggtgctgcagaagctggccgaggattatccgctgccgaag
atcctgctcgagcaccgcggcatgtccaagctcaagtcgacctataccgacaagctgccg
aagatggtcaacccgaacactggccgcgtgcacacgaattacgcgcaggcggtggcgatt
accggccgcctgtcgtcgaacgagccgaacctgcagaacatcccggtgcgtaatgccgaa
ggccgccgcatccgcgaagccttcatcgccgcccccggccacgtgatcgtctcggccgac
tattcgcagatcgagctgcgcatcatggcccacatctcgggcgacgcggcgatgctcaag
gctttcgccgacggcgaggacatccaccgcgccaccgccgccgagatcttcggcatcccg
ccggccgacgtgcaaagtgagcagcgccgctacgccaaggtgatcaacttcggcctgatc
tatggcatgagcgctttcggcctggccggcaacctgggcatcgaacgcgccgcggccgcc
aactatatcgagcgctatttcgcgcgcttctcgggcgtgaagcagtatatggacaacacg
cgcctggaagcgaaggcgcgcggctacgtcgagaccgtgttcggccgccgcctgtggctg
cccgagatcaattcgccgaacggcccgcgccgcgccggcgccgaacgcgcggcgatcaat
gcgccgatgcagggcacggcggccgacctgatcaaaatggcgatgatcgcggtgcaaaac
tggattgaaagcgatgggctgggcacgcgcatgatcatgcaggtgcatgatgaactggtg
ctcgaagtgccggaaggcgagctggaactggtgcgggtcaagctgccggagctgatggcg
ggcgtggccaagttgaatgtgccgctgttggccgagactggcgtgggcaagaactgggaa
gaagcgcactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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