KEGG   Massilia oculi: DIR46_22475
Entry
DIR46_22475       CDS       T05448                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mtim  Massilia oculi
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtim03400]
    DIR46_22475
DNA repair and recombination proteins [BR:mtim03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DIR46_22475
    Archaeal homologous recombinant proteins
     DIR46_22475
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 nSTAND3
Other DBs
NCBI-ProteinID: AWL06923
UniProt: A0A2S2DNG1
Position
complement(4978326..4982075)
AA seq 1249 aa
MKILRISGKNLASLAGEFAVDFESGPLATTGLFAISGPTGAGKSTLLDALCLALYDATPR
MLKRAGSQLPDVGGDTVSALDPRTLLRRGAAEAWAEVDFVGSDDGRYRARWSVRRSYGKP
GGALQPARMSLHRLPELAPIGGTKTEVAAEIVQRIGLSFEQFTRAVLLAQNEFSAFLKTD
ENERGELLETLTGTTVYSEISRRAFERYKLEQQRTQVLQARLANVAPLAPSERAQLDLER
SAADAAREALDSRYTLLEQQLRWHQELDKLGRGEAQAEEALAAANGERVATAERRQRLAT
LEAVQSARPLTVEVQRLEAERRQTHSAVAKLEGELAAALEARRAGNAEVDAAIARLDASE
ERLRAAGPQLDQAKALDAALETLAPGHAQAKAALEAARQQAREARAQHGSKSEQLAHARG
LIEAASAWLTAQSRHEAVATGWPQWERLLRQAGQAQAALAAGETALAATRTAADQAAGRD
AQAASALAQAIERLDTLEANRRAAMAALGQFDAEAIGAERQQLEGRRERLAAAERTWLEL
SAARETLAGLARETERAATAAAGAERALQEARAAAPALEAAMAQAERSLSAAELACAANV
EQLRAHLVDDDPCPVCGALAHPYAHQDATLKAMLTGLRAEVDGCRAGVRENGALEATHGA
ALAATRERLAALSQDRTTLDLRIAGLLDAWEADPLAAEAPAEPERSDWFGAQRGAVREAL
DALARREQAWRAAASARDAAQRDVDGAQSVLAGLRRNAEAERDTAARLQNELKTLDAGRQ
AAAAQLDALLAELDPAMAAAHGDGWQTAWRRDPAGWSQARATEADGWREQTEAQARGAAA
SATLEVEAGALQARIAEIDAAGARLAAQFERIDGESSAKRAARASLWQGRAASEVERELT
AAVSGAREQVAARQQAANEAAQAETRARTAQAQLVERIAELDQSGATASARLADWLEDYR
RQADGLDDIADTDELARLLQVGAAWLAQERSALNAIETGVANATAVLAERRARRAAHLES
APPDGQPMDVIQAMVDALVVERQASIEAATALRLRAMQDDERRRQAESSLAEIERQQAVE
QRWGKLSELIGSSDGKKFRNYAQQFTLDVLLGYANEHLKQLARRYRLERVSYQGMPSLAL
MVRDQDMGGEVRSVNSLSGGESFLVSLALALGLASLSSNRVRVESLFIDEGFGSLDSETL
GVAMDALDALQSMGRKVGVISHVQEMTERIATKVLVRPAGGGSSAVVVE
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgaagatcctccgtatcagcggcaagaacctggcctcgctggcgggcgaattcgcggtc
gacttcgagtccggaccgctggccaccaccggcctgttcgccatcagcggcccgaccggc
gcgggcaagagcaccctgctcgacgccctgtgcctggcgctgtacgacgccaccccgcgc
atgctcaagcgggccggcagccagttgccggacgtcggcggcgacaccgtctcggcgctc
gatccgcgcaccctgctgcggcggggcgcggccgaggcctgggccgaagtcgacttcgtc
ggcagcgacgacggccgctaccgcgcgcgctggagcgtgcgccgttcctatggcaagccg
ggcggcgcgctgcagccggccaggatgagcctgcaccgcctgccggaactcgcgccgatc
ggcggcaccaagaccgaagtggcggcggagatcgtgcagcgcatcggcctgtcgttcgag
cagtttacgcgcgccgtgctgctggcgcagaacgagttctcggctttcctcaagaccgac
gagaacgagcgcggcgagctgctcgagaccctgaccggcaccacggtctacagcgagatc
tcgcgccgcgccttcgagcgctacaagctcgaacagcagcgcacccaggtgctgcaggcc
aggctcgccaatgtggcgccgctggcaccgagcgaacgcgcccagctcgacctcgagcgc
agcgccgccgacgccgcgcgcgaagcgctcgacagccgctacaccctgctggaacagcag
ctgcgctggcaccaggagctcgacaagctcgggcgcggcgaagcccaggccgaggaagcg
ctggccgccgccaacggcgagcgtgtcgcgactgccgagcgacgccagcgcctggccacg
ctggaagcggtacagagcgcgcggccgctgaccgtcgaagtccagcgcctggaagccgag
cggcgccagacccattccgccgtcgccaagctggaaggcgagctggctgcggcgctggaa
gcgcgccgcgcgggcaacgccgaagtcgacgccgccatcgcgcgcctcgacgccagtgaa
gagcggctgcgcgccgccggcccgcaactggaccaggccaaggcgctggatgcggcgctc
gagacgctcgctcccggccatgcccaggcaaaagccgcgctggaagcggcgcgccagcaa
gcccgcgaggcgcgtgcccagcatgggtcgaagtccgaacaactcgcgcacgcacgcggc
ctgatcgaggccgcctcggcgtggctgacggcccagtcgcggcacgaagccgtagccacc
ggctggccgcagtgggaacgcctgctgcgccaggccggccaggcacaagccgcgctggcg
gccggcgaaacggcgctggcggcaacccgcacggcggccgatcaggcggccggacgtgac
gcccaggcggccagcgcactcgcacaggccatcgaacgactcgacaccctggaggcgaac
cggcgcgcggcgatggcggcgctcggacagttcgacgccgaggcgatcggcgccgagcgc
cagcagctggaaggacgccgcgaacggctggcggcggccgaacgcacctggctcgagctg
tcggcggcgcgcgaaacgctggccggactcgcgcgcgaaaccgagcgcgccgcaaccgct
gccgccggcgccgaacgcgccctgcaggaggcgcgcgcggcggcgccggcactggaagcg
gcgatggcgcaggccgaacgctcgctgagcgccgccgaactggcgtgcgccgccaatgtg
gagcagctgcgcgcgcacctggtcgacgacgatccctgccccgtgtgcggcgccctcgcg
cacccatacgcccaccaggatgcgacgctgaaggcgatgttgaccggcctgcgggccgaa
gtcgatggctgccgcgcgggcgtgcgcgagaatggtgcgctggaggcgacccacggcgcc
gccctcgccgccacccgggaacgactcgcggcgctgtcccaggaccgcacgacgctcgat
ctgcgcatcgccggcctgcttgatgcctgggaagccgatccactggcggccgaggcgcca
gccgaaccggaacgcagcgactggttcggcgcccagcgaggcgccgtgcgcgaagccctc
gatgcgctggcgcggcgcgagcaagcctggcgcgccgccgccagcgcgcgcgacgcggcc
cagcgcgacgtcgacggcgcgcaatcggtgctggccgggttgcgccggaatgccgaggcc
gagcgcgacacggcggcccgcctgcagaacgagctgaaaacactggacgccggccggcag
gcggcagccgcgcagctggatgccctgctggccgaactcgatcctgccatggccgccgcc
cacggcgacggctggcagacggcgtggcgccgtgatcccgcaggctggagccaggcccgc
gcgacggaagccgacggatggcgcgagcagaccgaggcccaggcgcgcggcgccgccgcg
agcgcgaccctggaagtcgaagcaggcgcgctgcaggcgcgcatcgccgagatcgatgcg
gcgggcgccaggctggccgcgcagttcgagcgcatcgacggcgagtcgagcgcgaaacgc
gcggcgcgcgccagcttgtggcaaggccgcgcggcgagcgaggtcgaacgcgagctgact
gccgccgtgagcggcgcgcgcgaacaggtagcggcgcgccagcaagcagccaatgaggcg
gcccaggccgagacccgggcccgcacggcgcaggcccagctggtcgagcgcatcgcggaa
ctcgaccagtccggcgccacggccagcgcgcgactcgccgactggctggaagactaccgg
cgccaggccgatggcctcgacgacatcgcggataccgacgaactggcgcgcctgctgcag
gtcggcgccgcctggctggcgcaggagcgcagcgccctgaacgccatcgagaccggggtc
gccaatgccaccgcggtcctggccgaacggcgcgcccggcgcgcggcgcatctcgagtcg
gcgccgccggacggccagccgatggacgtcattcaggcgatggtcgacgcgctggtggtc
gaacgccaggcgtcgatcgaagcggcgaccgcgctgcgcctgcgtgcgatgcaggacgac
gagcgacggcgccaggccgaatcgagcctggccgagatcgagcgccagcaggcggtcgag
cagcgctggggcaagctgtcggagctgatcggctccagcgacggcaagaagttccgcaac
tacgcccagcaattcacgctggacgtgctgctcggctacgcgaatgaacacctgaagcag
ctggcccggcgctaccgcctggaacgcgtcagctaccagggcatgccgtcactggcgctg
atggtgcgcgaccaggacatgggcggtgaagtgcgttcggtcaattccctgtcgggcggc
gaatccttcctggtgtcgctggcgctggccctgggcctggcgtcgctgtcctcgaaccgg
gtgcgggtcgaatcgctgttcatcgacgagggcttcggcagcctcgacagcgagacgctg
ggggtggcgatggacgccctggatgcgctgcagtcgatgggccgcaaggtcggcgtgatc
tcgcacgtgcaggagatgaccgagcggatcgcgaccaaggtgctggtgcgacccgccggc
ggaggcagcagcgcggtcgtggtggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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