KEGG   Massilia oculi: DIR46_23790
Entry
DIR46_23790       CDS       T05448                                 
Name
(GenBank) hypothetical protein
  KO
K18304  LuxR family transcriptional regulator, quorum-sensing system regulator LasR
Organism
mtim  Massilia oculi
Pathway
mtim02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DIR46_23790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mtim03000]
    DIR46_23790
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:mtim01504]
    DIR46_23790
Transcription factors [BR:mtim03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    DIR46_23790
Antimicrobial resistance genes [BR:mtim01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexPQ-OpmE [MD:M00769]
    DIR46_23790
SSDB
Motif
Pfam: Autoind_bind GerE HTH_23 Sigma70_r4_2 HTH_28 YcaO DUF505 HTH_40
Other DBs
NCBI-ProteinID: AWL07150
UniProt: A0A2S2DP47
Position
5290901..5291587
AA seq 228 aa
MERVLVQHCAGLGFDQVLFGVVNSRHTRFESAFLRSNYSANWRDRYDRNGFAYVDPTVAH
CLSSTTPIVWEPGTFASSPQQAELYEEASAHGIRTGATLPIHGPQGEFGVISFASDARPD
VAAQRAMNEALPMLSLVRDYAFASSGRFREEAARPEEAPRLTRRELEVLQWVMAGKSSWE
VARITGCSEATVNFHLANVRQKFDVNTRQQAVVKAIALGLITPEDHHR
NT seq 687 nt   +upstreamnt  +downstreamnt
ctggagcgcgtccttgttcaacattgcgcggggctgggcttcgaccaggtgctgtttggc
gtcgtcaactcgcgccatacccgcttcgagtcggccttcttgcgcagtaattattccgcc
aactggcgcgatcgctacgaccgcaacggcttcgcctacgtcgatccgaccgtcgcccat
tgcctgtcgagtacgacgcccatcgtgtgggagccgggtacctttgcttccagcccccag
caggccgagctgtacgaggaagcgagcgcccacggcattcgcactggtgcgaccctgccg
atccacgggccgcagggcgaattcggggtgatcagtttcgcgtccgacgcccggccggat
gtcgctgcacagcgcgcgatgaacgaggcgctgccgatgctgtcgctggtgcgcgactat
gcgttcgcgtcttccgggcgtttccgcgaggaggcggcgcggccggaggaggcgccgcgc
ctgacgcgccgcgagctggaagtgttgcagtgggtgatggcgggcaagtcgtcatgggaa
gtcgcgcgcatcaccggctgttccgaagccaccgtcaattttcacctggcgaatgtgcgt
caaaaatttgacgtcaacactcgccagcaggcggtggtcaaggccatcgccctggggctc
atcacccctgaagatcaccatcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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