KEGG   Mycobacterium tuberculosis KZN 4207: TBSG_03487
Entry
TBSG_03487        CDS       T01690                                 
Name
(GenBank) alternative RNA polymerase sigma factor sigD
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mtk  Mycobacterium tuberculosis KZN 4207
Brite
KEGG Orthology (KO) [BR:mtk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtk03021]
    TBSG_03487
Transcription machinery [BR:mtk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TBSG_03487
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_16 Sigma70_ECF
Other DBs
NCBI-ProteinID: AEB05616
Position
complement(3824284..3824922)
AA seq 212 aa
MVDPGVSPGCVRFVTLEISPSMTMQGERLDAVVAEAVAGDRNALREVLETIRPIVVRYCR
ARVGTVERSGLSADDVAQEVCLATITALPRYRDRGRPFLAFLYGIAAHKVADAHRAAGRD
RAYPAETLPERWSADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETA
AAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
NT seq 639 nt   +upstreamnt  +downstreamnt
atggtcgatccgggagttagcccgggatgtgtccgcttcgtaacgttggagatatcgccg
tcgatgacaatgcaaggggaacgtctcgacgctgtggttgcggaggccgtggcaggagac
cggaacgcgcttcgggaggtgctggagaccatccgcccgatcgtcgtgcgatattgccga
gcgcgagtcggcacggtcgagcggagcggcctgtcagcagatgacgtggcacaggaggtg
tgcttggccaccataacggcgctgccgcgctatcgggaccgcggccggccattcctggcg
tttctgtacggcatcgcggcgcacaaggttgccgacgcccatcgggcagccggccgtgac
cgggcctatcccgccgaaacgcttcctgagcgctggtcagccgacgccggcccggagcag
atggccatcgaggccgattcggtcacccggatgaacgaattgcttgagatcttgccggcc
aagcaacgcgagatcctcattctgcgtgttgtcgtcggcctgtccgcggaagagaccgcc
gccgccgtcggcagcaccacgggggcggtccgggtggcccaacaccgtgcacttcagcgg
ctgaaggacgagattgttgcggcaggtgactatgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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