KEGG   Thermothelomyces thermophilus: MYCTH_2306855
Entry
MYCTH_2306855     CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCTH_2306855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtm03019]
    MYCTH_2306855
Messenger RNA biogenesis [BR:mtm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MYCTH_2306855
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MYCTH_2306855
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind DUF3819 CNOT1_HEAT CNOT1_TTP_bind
Other DBs
NCBI-GeneID: 11513956
NCBI-ProteinID: XP_003664247
JGI: 2306855
UniProt: G2QEX3
Position
4:complement(join(2573941..2573982,2574047..2579988,2580080..2580404,2580543..2580800))
AA seq 2188 aa
MVPQPRPGTFSPSPAAQPLYTGTAHSPHPSHAGALSAGASPSTSSPTGSSSLTKIAVAQV
YLLLSTIKEDKDDPRKWESQIESLRKLLDEHGMDVFTRYFARLVAANASQIFPGLNRPGP
NPGNHHLLVAEMKKLSREFPQARKIAESIETGTEDIFRDFDLSGFMEHFQLDALQKTVLA
LAFKLGSRADLKTKADAILSTNFPTFVNILSQANGEHRDLDPDFVAELLDRFIQVHPPNF
NAAAKRELEHKVQQRYAQSPDAKPPPAQVLSALDLVRMLADKPPNALALYIHRTGPAFTA
DEETCTNFLQNRPTNVHLSEEQVSVALMYTTISQTPRHNPSVLVASLRRILPDTFSWQDV
VSCFDHSGARVTSAQFLRLYNALLPIAQEDGDRFDIQRLWGGEWENPETQLSFICAFASL
KPEQLDATTIPRLKPTFTVEEYAQSSPQIRETAAHAVKHPLVSEAALSAVFNVALHSMHA
SQSIEAKRLFQDVVIRNLAIFVVSAFGVPKPWPSMAEDTLVSLFDNFLTRSPEADFVMDS
LWRRDKEWVKQRLIDAHALKPICLPLIFEHAVRQNWLDELVYLPIGFGLDLTALAHAEGY
LDLQQWARRNADRAPEMARALLQFLLIKANFELQYQRPPEGQPPIKASTTLQVRTVHALL
QILEEFLPKTPMQELIVVQRTCITVYPRLINYGEGFDDIIDANGRDGNALPPAANAKMEE
HYKKMYGDEIQVRNVVEILERYKRSRDPLDQDIFACMIHGLFDEYAHYVDYPLEALATTA
VLFGGIISHKLISDLPLQIGLGMILEAVRDHHPDEPMYKFGLQALMQLFGRLREWPGFCA
QLIQIPGLQGTEAWKKAEEVVREHDEELARSRNGAGMANSGIIGHDGLTNGNREDNLGSE
QHPPPFTSVNVDPPPPGVVYEDPSEEAQGKIQFVLNNLTDTTLHSMFKEIRDMLEVKHQQ
WFASHLVEERAKMQPNYHHVYLELVKQFEDKALWAEVLRETYISVSRMLNSELTMQNSTE
RAHLKNLGGWLGLLTLARDKPIKHKNIAFKQLLIEAHDTKRLIVVIPFVCKVLIQGASSN
IFKPPNPWLMDIIHLLIELYHNAELKLNLKFEIEVLCKGLNLDHKAIEPSGEILNRAPVE
ELGDMMGPEALENFENLSLNGMPGVNNALSSHPAFTIPDLGPSLSIPQTEVVSAAKLHEI
VRQALTRALQDIIQPVVDRSVTIAAISTHQMVRKDFATEPDENRVRTAAINMVKSTAGSL
ALVTSKEPLRANLANYLRNLSADLPQGLPEGIIMLCVNSNLELASSIIEKCAEERAIPEI
EDLMEPELEARRRHRLQRPSEPYIDHGLSRWAMTIPHPFKLQPSLGGLNAEQMAIYDDFA
RQSRANPAAAGPPHGPSASDARTLPSETLGDQYSAVSSMPTPAETPSMPHLGAQLQHYPQ
VHLAMANGRQAGLNQIDSRSIADRINKLLEQLTTTAASATEEHFSDLPRSHPVLDIVDAL
VQLVIKTQQTSEEFVAYAANQISQLLFRQPEGDLLLETLVHVLETLRKIAGPVISEQIRQ
LFHQQPGQLFLSLPLITALLPTDLLDWRNIDAATAELLQQRKEGSITFLEQLMDLTLLND
SPLALYADFVRSLEEAWSWITEEPDVPGAARFKSKVLAPPPELPANLSKEELDAIQLDQM
DYIFEEWIHLCNNRFATEKSAMIFVQQMHSRGVVSNREDFLLFTRLALDKSVERFEQSIH
SDGGLTEAYQALEALVRMIMIFVKSHQDNEQSAGVAFLESVLSLSVLVLNSHHAKRGERF
NQRVFFRFYSLILHELADLARHHLSESDYQQFILKFAARLYDLRPSLYPGFIFGWTELVA
HRNFVPVILRLPDRAGWAPFTKLLTQVLSYLGDLLKPFSVSPLAKGIYHGVLRFLAILHH
DFPEYIAASHVELCQSIPPHVTQLINFILTATPPAFNKAADPLQPGLKADRIPEMREAPM
TLFDSAGVLREIGLLNIVEHALQNGPSEDAIAQINHAINKVEAEETAFGFVPIGVNRRVI
AAVVAQFAHFAVTRAGSKSDAPIFVPGASDVKTLRMLVTEVSPEARYYLLCSMVNELRYP
NASTNYFSHALLELFGQDMSDPEETDIRQQIVRILLERLVGYWPQPWGLMITVLELLKNE
KYHFFELQFIKSTPEVAQRFAEILRPAA
NT seq 6567 nt   +upstreamnt  +downstreamnt
atggtcccccaacccagaccgggaaccttctcgccgagtccagcagcgcagcccctctac
actggcaccgcccactctccccatccctctcacgccggtgcgctgagtgcgggtgccagc
ccaagtaccagcagccccactgggtcgagttccctgaccaagatcgcagtcgcccaggtt
tatctccttctgagcaccatcaaagaggacaaggacgatcctcgcaagtgggagtcacag
atcgagtctctgcgaaagctgctcgatgaacacggcatggatgtgtttacaagatacttc
gcgcgactggtggccgcaaatgcctcccagatcttcccgggcctcaatcggccggggccg
aatccgggaaatcatcatttgctcgtagccgagatgaagaagctgtctcgggaattcccc
caggccagaaaaatcgcggagtccatcgagaccggcaccgaggatatattccgcgacttt
gacctctccggcttcatggaacacttccaactagatgctctccaaaagacagtgctggct
ctggccttcaagctcggatctagggccgacttgaagactaaagccgatgccatcttatcc
accaacttcccgacatttgtcaatatcctgagccaagcaaacggagaacatcgtgaccta
gatcccgacttcgtcgccgagcttctcgaccgcttcatccaagtgcacccccccaacttc
aacgccgcggcgaagcgggagttggaacacaaggtgcagcagagatatgcccagtcaccc
gacgccaaaccacccccggcccaagtgctctcggcgctcgatctggtgcggatgctcgct
gataagccgcccaacgctcttgcgctctatatccaccggacaggtccggcgttcaccgcg
gacgaggagacgtgcacgaacttcctacagaaccgccccaccaatgtccatctcagcgag
gaacaagtgtcggtggcattgatgtacacgaccatcagccagacaccgcggcataatcct
tcggtcctcgtcgcttctctcaggcgcattctccccgacaccttcagctggcaggacgtg
gtctcctgcttcgaccacagcggggctcgggtgacgtcggcccagttcttgcgcctgtac
aacgccctgttgccgatagcgcaggaggacggcgaccgcttcgacatacagcgcttgtgg
ggtggggagtgggagaacccagaaacacagctctccttcatttgcgcgtttgcatccctc
aaaccggaacaactggacgcgacgacaatcccgaggctgaaaccgaccttcacggtagag
gagtacgcgcagtcgtcgccacagatacgagagacggcagcacatgccgtgaagcacccc
ctcgtctccgaggcggccctttctgccgtctttaacgtcgcgctccactcgatgcacgcc
tcgcagagcatcgaagccaagcgcctctttcaggacgtggtcatccgcaacctggccatc
ttcgtggtctcggcattcggcgtccctaagccctggcccagcatggccgaagatacacta
gtgtcgctcttcgataacttcttgacaagatcgcccgaggccgactttgtcatggacagc
ctttggcgaagggacaaggagtgggtcaagcagcggctcatcgacgcgcacgctctgaag
cctatctgcctgccgctcattttcgagcacgctgtccgccagaactggctcgatgagctc
gtctacctgccgatcggcttcgggcttgaccttaccgccctggcccatgctgaaggctat
ctagatctgcagcagtgggctcgaaggaacgccgatagggctcccgagatggccagggca
ctgctccagttcttgttgatcaaggcgaactttgagctgcagtatcagcgccctccggaa
ggccaaccacccatcaaggcgagcacaaccttgcaggttcggacagtccatgcactgctt
cagatcctggaggagttcttgcccaagacgccaatgcaagagctgattgtggttcaacgg
acctgcatcaccgtgtacccgaggctcatcaactatggggagggcttcgacgacatcatc
gacgcgaacgggcgcgatgggaatgcgctcccgccagccgccaatgccaagatggaggag
cactacaagaagatgtacggcgacgagatacaagttcgcaacgttgtcgagattctggag
cggtacaaacggtcccgcgatcccttggaccaggacatcttcgcgtgcatgatacacggc
ttgtttgacgagtacgcgcattatgtcgactacccgctggaggccctggcaacgaccgca
gttctgttcggcggcatcatatctcacaaactgatctcggatcttccgctgcagattggg
ctgggcatgatcctggaggccgtccgagaccaccatcccgatgagccaatgtacaagttt
gggttgcaagctttgatgcaactctttggtcgccttcgggagtggccgggcttctgcgca
cagctcatccagatccccggtctccaggggaccgaggcatggaaaaaggcagaggaagtg
gtccgcgagcacgacgaggaactcgcacgctcccgcaacggcgccggcatggccaattcc
gggatcatcgggcacgacggcttgaccaacggcaaccgggaggacaacctaggatcggag
cagcatccgccgccgttcacctcggtgaatgtggacccgcctccgcctggtgttgtgtac
gaggaccctagcgaagaggcccaagggaagatccagttcgtgctcaacaacctcaccgac
accacgctgcattccatgttcaaggagatccgcgacatgctggaagtcaaacatcaacag
tggttcgccagccacctggtcgaagagcgcgcgaagatgcagccaaactaccatcacgta
tacctggaactcgtcaagcagttcgaggataaggcgttatgggccgaggtgctgcgcgag
acctacatcagcgtatcacgcatgctcaactcagagctgaccatgcagaactctaccgaa
cgggcgcaccttaagaatctcggaggctggcttggtctcctgaccctggcgcgagacaaa
ccaatcaaacataagaatatcgcgttcaagcagcttcttatcgaggcacacgataccaag
cgcctcatcgtcgtcatccccttcgtgtgcaaggtgctgattcagggcgcgtcctcaaac
atcttcaagccgcctaatccttggctgatggacattattcatctcctaattgaactttac
cacaatgccgagctgaagctgaatctcaagttcgagattgaagttctctgcaagggcctc
aatctggaccacaaagccatcgaaccatccggcgagatccttaatagggctcccgtggag
gagttgggtgacatgatgggcccggaagctctcgagaatttcgaaaatctctccctcaac
ggcatgcccggggttaacaatgccctctcgtcacacccggcctttaccattcctgacctt
gggccgagcctttcgattcctcagactgaggttgtcagcgctgccaagctgcacgagatc
gtccggcaagccttgacgcgcgcgttacaggacatcattcaacccgtcgttgatcgctcg
gtcacgatcgcggcgatttcgacgcaccagatggttcggaaggacttcgcgaccgagccc
gacgagaatcgtgtgcggacggcggcgatcaatatggtcaagtcaacagccggcagcctg
gcgctcgtcacctccaaggagccgttgcgcgcaaacctcgccaattacttgcgcaacctg
tccgccgatctaccccaagggctacccgagggcatcatcatgctgtgtgttaactccaac
cttgaactggcctcgagcatcatcgagaagtgcgctgaggaacgtgcgattccggagatt
gaagatttgatggagcccgagctggaggcgcggcgccgccaccggcttcagcggccttcc
gagccctacatcgaccacggattgagccgctgggcgatgaccattcctcacccgttcaag
ctgcagcctagtctcggcggcctgaatgccgagcagatggccatctacgacgactttgcc
cgccagtcaagggccaatcctgccgcggcgggacccccgcatggaccgtcggcgtcggat
gccaggactttgcccagcgagactcttggcgatcagtacagcgctgttagcagtatgccg
actcctgcggagactccgtcaatgccccatctgggagcgcagcttcagcactacccgcaa
gtgcaccttgcaatggcgaacggccgacaggctgggctcaatcagatcgactcccggagc
attgctgataggatcaacaagctactcgagcagctgacgaccactgcggccagcgcgacc
gaggaacatttcagcgacctcccgaggtcccacccggtcttggacatcgtcgacgccctg
gtccagctcgtcatcaaaacacagcagacgtccgaggagttcgtggcttatgccgcaaac
caaatctctcagctcctcttccgtcagcccgagggcgatcttctcttggagactttagtg
cacgttctcgagactctccgcaagattgccgggcccgtgattagcgaacagatccgccag
ctcttccatcagcaacctgggcagttgttcctcagcctgcccctcatcacagccctgctt
cccactgacctgctcgactggaggaacatcgatgccgcgacagcggagcttctgcagcag
cgcaaggagggatcgataaccttcctcgagcagctcatggacctcacgcttctcaacgac
agcccgctcgccctctatgctgattttgtccggagcttagaggaggcgtggtcgtggatc
acagaggagccagacgtccccggggcagcacgcttcaagtcgaaggtgctggcgccgccg
cctgagctacccgccaatctgtccaaagaggagctcgatgctatccagctggatcagatg
gattacatttttgaggaatggattcatctgtgcaacaaccgctttgccaccgaaaagtcc
gccatgattttcgtccagcagatgcattcgcgcggcgtcgttagcaacagagaggatttc
ctgctcttcactcgtctggctctcgacaagtctgtcgagcggttcgagcagagcatccat
tcggacggcggcttgacggaagcgtaccaggcccttgaggcactggtcaggatgatcatg
atctttgtcaaatcccaccaagacaacgagcagtcggcaggtgtggcgtttttggagtcg
gtcctgtccctcagcgtgctggtgctgaacagtcaccatgccaagaggggtgagagattt
aaccagcgcgtcttcttccggttctactcgctcatcctgcacgagctggcggatctggcg
aggcatcacctatcggagagcgactatcaacagttcattctgaagtttgcggcgcgtctg
tacgatctccgccccagtctgtacccgggcttcatcttcggctggacggagctcgtcgcc
catcgcaacttcgtgcccgtgatcctccgcctcccggacagagcaggttgggcaccgttc
acgaagctgctcacgcaggtcctctcgtatctgggggaccttctgaagccattcagcgtt
tcgcccctggccaagggtatctaccacggagtgctgaggttcttggcgatcctccatcac
gatttccccgagtacattgccgcatcacatgtggagttgtgccagagcattccaccccat
gtgacacagctcatcaactttatcctcactgccactcctcccgccttcaacaaggcggcg
gaccccttgcagcctgggctcaaggcagataggattcccgagatgagggaagctcccatg
acgctgtttgactcggccggtgtgctacgggagatcggcctgctcaacattgtggagcac
gcgttacagaacggcccttcggaggacgccatcgctcagatcaaccacgccatcaacaaa
gttgaagccgaggagaccgcttttggcttcgtcccgatcggggtcaaccgtcgggtcatc
gcggctgtggttgcgcaattcgcccacttcgccgtcacccgtgctggctctaagagcgac
gcgcccatcttcgtgcccggggcgtctgatgtcaagacgctgcgaatgcttgtcaccgaa
gtgtctcccgaggccaggtactaccttctgtgcagcatggtcaatgagctccggtacccg
aacgcgtcaaccaactacttcagtcacgcgctgctggaactctttggtcaggacatgtcg
gacccggaggagacggatatccgccagcaaattgtgcgcatcctgcttgagaggctggtt
gggtactggccgcagccgtggggcctcatgatcacggtgctcgagttgctcaagaatgag
aaataccacttcttcgagctgcagtttatcaagtcgacgccagaggtggcccaaagattt
gcggaaatcctccgcccggctgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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