KEGG   Mycobacterium tuberculosis HKBS1: HKBS1_3419
Entry
HKBS1_3419        CDS       T03154                                 
Symbol
pvdS
Name
(GenBank) putative RNA polymerase sigma factor
  KO
K22468  polyphosphate kinase [EC:2.7.4.34]
Organism
mtq  Mycobacterium tuberculosis HKBS1
Pathway
mtq00190  Oxidative phosphorylation
mtq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtq00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    HKBS1_3419 (pvdS)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HKBS1_3419 (pvdS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtq03019]
    HKBS1_3419 (pvdS)
Enzymes [BR:mtq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.34  GDP-polyphosphate phosphotransferase
     HKBS1_3419 (pvdS)
Messenger RNA biogenesis [BR:mtq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HKBS1_3419 (pvdS)
SSDB
Motif
Pfam: PPK2 CutA1
Other DBs
NCBI-ProteinID: AHJ44065
Position
complement(3597300..3598187)
AA seq 295 aa
MDIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG
ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG
EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ
LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA
RLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR
NT seq 888 nt   +upstreamnt  +downstreamnt
gtggatataccatccgttgatgtgagcaccgcgaccaacgacggcgcgtcgtcgagagcg
aagggacacagatcagctgcgccgggccggcgcaagatctccgatgccgtctaccaagcc
gaattgtttcggctgcaaacagaattcgtgaagctgcaagagtgggcccggcattcgggt
gcgcgtctggtggtcatcttcgaaggccgtgacggagctggtaagggtggcgccatcaaa
cggatcaccgagtacctcaacccgcgagtggctcgtatcgcggcattgcccgcgccgacg
gatcgcgagcggggtcagtggtactaccagcgttatattgcccatcttcccgccaaaggt
gagatagtgctcttcgatcggtcctggtacaaccgcgccggtgtggagaaggtcatgggt
ttctgtacgccgcaggagtatgtgttgtttttgcggcagaccccgattttcgagcagatg
ctgatcgatgacgggattctgcttcgcaaatactggttttcagtctcagacgccgaacag
ttgcgccgattcaaggctcgacggaatgacccggtccggcaatggaagctcagcccaatg
gacctggaatcggtgtatcggtgggaggactattcgcgcgcaaaggacgagatgatggtg
cataccgacacccccgtcagcccctggtacgtggtggagtctgatatcaaaaagcacgcg
cggctgaacatgatggcccacttgctgtccacgattgactacgcagatgtggaaaagcca
aaggtcaagctgccgccacggccgcttgtgagtggcaactacaggcgtccgccccgcgag
ttgtcgacatacgtcgacgactatgtggccacgttgatcgcccggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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