KEGG   Marivirga tractuosa: Ftrac_2268
Entry
Ftrac_2268        CDS       T01365                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mtt  Marivirga tractuosa
Pathway
mtt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ftrac_2268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtt03019]
    Ftrac_2268
Enzymes [BR:mtt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Ftrac_2268
Messenger RNA biogenesis [BR:mtt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Ftrac_2268
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 UTP25 ERCC3_RAD25_C AAA_22 Phage_integrase DUF1634 HEM4 Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: ADR22247
UniProt: E4TKU4
Position
complement(2679384..2680625)
AA seq 413 aa
MRFEELNIIAPILRALKEENYSEPTSIQEQAIPLLLQKNDIMASAQTGTGKTAAFAIPIL
QHLEKDNSNSKKIKSLILTPTRELAIQIGESFTTYGKYTSIRNTVIFGGVNQNKQTAAIR
NGVDVLIATPGRLLDLMNQGFISLKDIQYFVLDEADRMLDMGFIHDIKKVIAVLPSKRQS
LFFSATMPDTIVELSRKILINPKKIAVTPVSSTAETIQQYLYYTNKSTKKDLLLHILKDS
KMDQVLLFDRTKHGADRIVKELKKKNISAAAIHGDKAQNQRQKALTQFKDKEIRVLVATD
IAARGIDIDKLQYVINFDIPNVAETYVHRIGRSGRAGEAGVSISLCEPEENDYLKDIEKL
INQKIPVVKDNPFPQTDKPMTTAEKKEFEKEKQRRKQEFFANRKKNGNRGGRR
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgcgattcgaagaacttaatattattgcgcctattttaagagcgctaaaagaagaaaat
tattcagaacctacttctattcaagagcaagccattccattattgttgcaaaaaaatgac
atcatggcaagtgcccaaacagggacaggaaaaaccgcagcttttgcaattcctattcta
cagcatcttgagaaggacaactcaaattccaaaaagattaagtcattaattttgacccca
actcgggagttagcaattcaaattggcgaaagctttacaacctacggcaaatatacttcc
atcaggaatacggtgatttttggaggggtaaatcagaataaacaaacagctgctatcaga
aatggagtggatgtgctgattgcaacgccaggtcgattgttggatttaatgaatcaaggc
tttattagcctgaaggatattcagtattttgtattagatgaagccgacagaatgttggat
atgggttttatccatgatattaagaaagtgatagctgtattgcctagtaaaagacaatca
cttttcttttctgctactatgcccgatactatagtggagctttcaagaaagattttgatt
aatccgaagaaaattgctgttacccccgtttcttcgactgcggaaactattcaacagtat
ttatattataccaataaatctacaaagaaagacctattgctgcatattttaaaagattct
aaaatggatcaggttttactctttgacagaaccaaacatggtgcagatcgaattgtaaaa
gaattgaagaagaagaatatttcagcagcggcaattcatggtgacaaagcacaaaaccaa
agacaaaaagctttaacgcaatttaaagataaagaaatccgagttttagtggctactgat
attgcggcacgtggaatcgatattgataaattgcagtatgtgatcaatttcgatatccct
aatgtggcggaaacgtatgtccacagaattggccgatcaggtagagctggtgaagcgggt
gtttctatttctctttgcgaacctgaagaaaacgattatctgaaagatattgaaaaactt
atcaatcaaaagattcctgtagttaaagacaacccatttcctcaaacggataaaccgatg
acaacagcggagaaaaaagaatttgagaaagaaaagcaacgcagaaagcaggagtttttt
gccaatagaaagaaaaatggaaatagaggaggaagaaggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (74)   

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