KEGG   Mycobacterium tuberculosis CAS/NITR204: J113_27330
Entry
J113_27330        CDS       T02652                                 
Name
(GenBank) RNA polymerase sigma factor SigM
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mtuc  Mycobacterium tuberculosis CAS/NITR204
Brite
KEGG Orthology (KO) [BR:mtuc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtuc03021]
    J113_27330
Transcription machinery [BR:mtuc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     J113_27330
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Melibiase
Other DBs
NCBI-ProteinID: AGL29405
UniProt: R4MEN1
Position
4381626..4382207
AA seq 193 aa
MSPATGTPSISCSAVITASYTGRRNQPPPRTPTMRCKTRCCQRTCGAGSLRYDAAVSSWL
HRIVVNACLDRLRRAKAHPTAPLEDVYPVADRTAQVETAIAVQRALMRLPVEQRAAVVAV
DMQGYSIADTRPDAGRGRGHRQEPLRPGAGPPSAAAGLSQHRGEHPALTPLPVRRSIDPR
ARRYPTSGYCHRA
NT seq 582 nt   +upstreamnt  +downstreamnt
atgtcgccggcgaccggtacgccttcgatcagttgttccgccgtcatcaccgccagctac
accggtcgccgcaaccagccacctccgaggacgccgacgatgcgctgcaagacgcgatgc
tgtcagcgcacctgcggcgccggctcgttgcggtacgatgccgccgtcagcagttggttg
caccgcatcgtggtcaacgcttgcctggaccggctgcgtcgggccaaagcccatccgacc
gcccctctagaagatgtctatccggtcgcggaccggaccgcgcaggtcgagaccgcgatc
gcggtgcagcgggcactgatgcggctgcccgtcgagcagcgggccgcggtggtcgccgtg
gacatgcagggctattcgatcgccgacacccgcccggatgctgggcgtggccgagggcac
cgtcaagagccgctgcgcccgggcgcgggcccgcctagcgcggctgctgggctatctcaa
caccggggtgaacatccggcgctgaccccgttgccggtccgtcgtagcatcgatccacgg
gctcgccgctaccccacatctggctattgccaccgggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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