KEGG T02653: J114

Mycobacterium tuberculosis EAI5/NITR206: J114_03365

Entry

J114_03365        CDS       T02653

Name

(GenBank) exonuclease V beta chain

K03582

exodeoxyribonuclease V beta subunit [EC:3.1.11.5]

Organism

mtue Mycobacterium tuberculosis EAI5/NITR206

Pathway

mtue03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:mtue00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    J114_03365
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtue03400]
    J114_03365
Enzymes [BR:mtue01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     J114_03365
DNA repair and recombination proteins [BR:mtue03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     J114_03365

SSDB

Motif

Pfam:

UvrD-helicase AAA_19 UvrD_C PDDEXK_1 AAA_30 UvrD_C_2 AAA_22

Other DBs

NCBI-ProteinID:

AGL30066

Position

complement(721293..724892)

AA seq 1199 aa
MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR
ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT
THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA
LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA
LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG
GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR
LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV
VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG
LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR
VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA
AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE
GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT
PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRTS
YSDLVRGSEAVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLVHAV
LETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAALTL
RQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLGSAG
LGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGDTAADYGFERLTEAMLHSDYPLQA
LLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFTWNPPTALV
VDSRICSTGEGCSREAHRRRFCRRGLRDGAGLQPGRCAGRVGCACGATSLCTGRGERRAG
GVGGSGGGPRATGRFGVCGSVVDRAGCWTRRPAVAGSGGLVGGGAGQSVARRSTRAAPV

NT seq 3600 nt +upstreamnt +downstreamnt
atggaccgcttcgagctgctgggcccgttgccgagggagggcaccaccaccgtgctggaa
gccagcgccggcaccggtaagacgttcgcgctggccggtctggtcacccgctatctggcc
gaaaccgccgcgacgctcgacgagatgttgttgatcacgttcaaccgtgcggccagccgg
gagttacgcgagcgagtgcgcgggcagatcgtcgaggccgtgggcgcgctacaaggcgac
gcgccgccgagcggcgagctcgtcgagcacctgctgcgcggcagcgacgccgagcgcgcc
cagaagcggtcgcggctgcgtgacgcgctggccaacttcgacgcggcaaccatcgccacc
acccacgagttctgcggctcggtgttgaaatccctcggtgtggccggtgacaacgccgcc
gacgtggagctcaaggagagccttaccgacctggtcactgagatcgtggacgatcgctat
ctggcgaacttcggtcgtcaggagaccgatccggagctgacctacgccgaggcgctggcc
ctggcccttgccgtcgtcgacgacccgtgcgcccaactgcgcccgcctgatcccgagccc
ggcagcaaggcagcggtgcggctgcgctttgccgccgaggtgctcgaggaactcgagcgc
cgcaagggccggctgcgtgcgcaaggattcaacgatctgctgatccgtttggcgacagcc
ctcgaggcggccgactcgccagctcgcgatcggatgcgggaacgctggcggatcgtgctg
gtggacgagtttcaagataccgaccccatgcagtggcgggtgctcgagcgcgcgtttagc
cggcattcggcgctgatcctgatcggcgatcccaagcaggcgatctacggctttcgcggc
ggcgacatccacacctacctcaaggcggccggcaccgccgatgcccgctacacgttgggc
gtcaactggcgcagcgaccgggcgctggtcgagagcctgcagacggtgctgcgcgatgcg
accctgggtcacgccgacatcgtcgtccgcggcaccgacgcccaccacgccgggcaccgc
ctggcctcggcgccgcgcccggcgccgtttcggttgcgcgtggtcaaacggcacacgctc
gggtatgacgggaccgcccacgtcccgatcgaggcgctgcgccggcacatccccgacgac
ctggccgccgacgtcgcggcgctactggccagcggggccaccttcgccgggcggcccgtg
gtggccgcagacatcgcggtgatcgtcgagcatcacaaagacgcgcgggcgtgccggaat
gcgttggcggaggcgggcatcccggcgatctacaccggtgacaccgacgtgttcgcctcg
caggccgccaaggactggctgtgcctgctggaggcgttcgacgcgccgcagcgcagcggg
ctggtccgcgccgccgcgtgcacgatgttcttcggtgagaccgcggaatcgcttgccgcc
gagggcgatgcgctgaccgatcgggtggccggcacgttgcgcgagtgggccgaccacgca
cgccatcgcggtgtggccgcggtgtttcaggccgctcagctggccgggatgggccggcgc
gtgctgagccagcgcggcggcgaacgggacctgacagacctggcgcacattgcgcagctg
ctgcacgaggccgctcatcgcgagcggctcggcctgcccgggctgcgcgattggctgcgc
cgccaggccaaggcgggtgccggcccgccggaacacaatcgccggttggacagcgacgcc
gcggcggtgcagatcatgaccgtcttcgtggccaagggactgcagtttcccatcgtgtat
ctgccgttcgccttcaaccgcaacgtccgcagcgacgacatcctgctgtatcacgacgac
ggcacccgctgcctgtacatcggcggcaaggacggcggtgctcagcggcgcaccgttgag
gggctgaaccgcgtcgaggcggcccacgacaacctccggctcacctatgtcgcgcttacc
cgcgcgcaatcgcaggtcgtcgcgtggtgggcaccgacgttcgacgaggtcaacggcggg
ttgtcgcggttgctgcgcgggcgccggcccggccagtcgcaggtaccggaccggtgtaca
ccacgcgtcaccgacgagcaggcctgggcggtgttcgcgcagtgggaggccgcgggcggg
ccgtcggtcgaggaatcggtcatcggtgctcgcagttccctcgaaaagccggtgcccgta
cccggtttcgaggttcggcactttcaccgccggatcgacaccacgtggcggcggacctcg
tactcggatctggtgcggggctcggaagccgtcaccgtcaccagcgagccggcggccggc
ggccgtgcggacgaggtggagatcgccgtcgtcgccgcgcccggttccggcgccgatctg
acatcaccgctggccgcgctgccgtcgggggcgtcgttcggctcgctggtgcacgcggtg
ctcgagaccgcggacccagccgctcccgatctggctgccgaactggaagcccaggtgcgc
cggcacgcgccgtggtggaccgtggacgtcgaccacgcgcagctggctcccgaactggcc
cgagcgttgctgccgatgcacgacacgccgctgggacccgccgccgccgcactgacattg
cggcagatcggtgtgcgtgatcgtctgcgggagttggacttcgagatgccgctggccggg
ggcgatctgcgcggccggtccccggacgtgtcgctggccgacgtgggtgagctgctggcg
tcgcacctgcccggcgacgacccgttgtcgccctacgccgatcggcttggttcggccggg
ttgggtgatcaaccgctgcgtggctacctggcggggtcgatcgacgtggtgctgcggcta
cccgggcagcgatatctggtggtcgattacaagaccaatcaccttggtgacaccgccgcc
gattacggcttcgagcggttgaccgaggccatgctgcattcggactacccactgcaggcg
ctgctgtatgttgttgtgctgcaccgctttctgcggtggcggcagcgggattacgctccg
gcgcgccatctcggcggggtgctgtacctgtttgtgcggggcatgtgcggtgcggcgacg
ccggtgacggccgggcatccggccggtgtgttcacctggaacccgcccacggcgttggtg
gtggactctcggatctgctcgaccggggaaggctgcagtcgtgaagctcaccgacgtcga
ttttgccgtcgaggcctccgggatggtgcgggccttcaaccaggccggtgtgctggacgt
gtcggatgtgcatgtggcgcaacgtctctgtgcactggccggggagagcgacgagcgggt
ggcgttggcggtagcggtggcggtccgcgcgctacgggccggttcggtgtgtgtggatct
gttgtcgatcgcgcgggttgctggacacgacgacctgccgtggccggatccggcggactg
gttggcggcggtgcgggccagtccgttgctcgccgatccacccgtgctgcacctgtatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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