KEGG   Mycobacterium tuberculosis Haarlem: TBHG_00849
Entry
TBHG_00849        CDS       T02845                                 
Name
(GenBank) DNA helicase Ercc3
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mtul  Mycobacterium tuberculosis Haarlem
Pathway
mtul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mtul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TBHG_00849
  09124 Replication and repair
   03420 Nucleotide excision repair
    TBHG_00849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtul03021]
    TBHG_00849
   03400 DNA repair and recombination proteins [BR:mtul03400]
    TBHG_00849
Enzymes [BR:mtul01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TBHG_00849
Transcription machinery [BR:mtul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     TBHG_00849
DNA repair and recombination proteins [BR:mtul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     TBHG_00849
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom Cox20
Other DBs
NCBI-ProteinID: AGV30579
Position
complement(961987..963615)
AA seq 542 aa
MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV
DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP
MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR
LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL
TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV
FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR
VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA
ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ
EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP
AI
NT seq 1629 nt   +upstreamnt  +downstreamnt
gtgcagtccgataagacggtgctgttggaagtcgaccatgaactggccggcgctgcacgc
gccgccatcgcgccgttcgccgagctggaacgtgcacccgaacatgtccacacctaccgc
atcacaccgctggcactgtggaatgctcgcgccgccggccatgatgccgagcaagtcgtc
gacgcgctggtcagttactcccgctacgcggtgccgcaacccttgctcgtcgacatcgtc
gacaccatggcccgctacggacgactgcagttggtcaagaacccggcccatggcctgacg
ctggtgagcctggaccgcgcggtgcttgaggaagtgctgcgcaacaagaagatcgcgccg
atgcttggcgcccgcatcgatgacgacaccgtcgtcgtccaccccagcgaacgcggccgg
gtcaagcagctgctgctcaagatcggttggcccgcagaggatctcgccggctacgtcgat
ggtgaagcgcacccgatcagcctgcaccaggagggctggcagctgcgcgattaccagcgg
ctggccgcggactcgttctgggcgggcggctccggggtggtggtgctgccatgtggggcc
ggcaagacgctggtcggtgcggccgcaatggccaaagccggcgcgacgacgttgatcctg
gtcaccaatatcgtcgcggcccggcaatggaaacgagagctggtcgcgcgcacctcgctc
accgagaatgagatcggcgaattctcgggagaacgcaaggaaatccgacctgtcaccatc
tcgacataccagatgatcacccgccgcactaagggcgagtaccgccatctggaactgttc
gacagccgcgactgggggctcatcatctatgacgaggtgcacctgttgccggcaccggtc
ttccggatgaccgctgacctgcagtccaaacggcggctggggctgaccgccacgttgatc
cgtgaagacggacgcgagggcgacgtgttttcccttatcggaccaaagcgctatgacgcg
ccgtggaaggacattgaggcgcagggctggatcgcgccagctgagtgcgtggaagtccgg
gtcacgatgaccgacagcgagcggatgatgtacgccaccgccgaacccgaagaacgctac
cggatctgctcgacggtgcacaccaaaattgctgtggtcaagtcgattctggcgaagcac
ccggatgagcagaccctggtcatcggagcgtacttggatcagctcgacgagctgggcgcc
gagctcggcgctccggtgattcaggggtcgacaaggaccagcgaacgcgaggcactgttc
gacgccttccgccgcggcgaggtcgctacgctcgtggtgtccaaggtggctaacttctcc
atcgacttgccggaagccgccgtggcggtacaggtttcgggaacattcggctcacgccag
gaagaggcgcaacggctcggccggatattgcgacccaaggccgacgggggcggtgccatc
ttctactcggtggtggcccgcgacagcctggatgccgagtacgccgcacaccggcagcgg
tttttagctgagcagggctacggttacatcatccgcgacgccgacgacctgctgggcccg
gcaatttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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