KEGG   Mycobacterium tuberculosis KZN 605: TBXG_001897
Entry
TBXG_001897       CDS       T02141                                 
Name
(GenBank) RNA polymerase sigma factor sigC
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mtz  Mycobacterium tuberculosis KZN 605
Brite
KEGG Orthology (KO) [BR:mtz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtz03021]
    TBXG_001897
Transcription machinery [BR:mtz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TBXG_001897
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 Dioxygenase_N DUF134 CHMI
Other DBs
NCBI-ProteinID: AFM49306
Position
complement(2089087..2089644)
AA seq 185 aa
MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR
AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED
LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEP
DDLTG
NT seq 558 nt   +upstreamnt  +downstreamnt
atgaccgcgacggcaagcgacgacgaggccgttaccgcactcgccttgtcggcggccaag
gggaacgggcgggcccttgaggcgtttatcaaagccacccagcaagacgtgtggcggttc
gtcgcctatctgtccgacgtgggcagtgcggacgatctcacccaagagacattcctacga
gcgatcggcgccatcccgcggttttccgcacgctccagcgcccgaacttggttgctggcc
atcgcgcgccatgtcgtcgccgatcacatccgccacgtccgatcccggccccgcaccacc
cgcggcgcgcgtcccgaacatctcatagacggcgaccgccatgcccgcggattcgaagac
ctcgtcgaggtaaccacgatgatcgccgacctaaccaccgaccaacgggaagcgctgctg
ctgacccagctgctcgggctgtcctatgcggacgccgcggcggtgtgcggctgcccggtg
ggcaccatccgatcccgtgtcgctcgagcgcgcgatgcgctgcttgccgacgcggagccc
gacgacctcaccggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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