KEGG T05668: HYN43

Mucilaginibacter celer: HYN43_021725

Entry

HYN43_021725      CDS       T05668

Name

(GenBank) RtcB family protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

muh Mucilaginibacter celer

Brite

KEGG Orthology (KO) [BR:muh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:muh03016]
    HYN43_021725
Enzymes [BR:muh01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     HYN43_021725
Transfer RNA biogenesis [BR:muh03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    HYN43_021725
Prokaryotic type
   tRNA splicing ligases
    HYN43_021725

SSDB

Motif

Pfam:

RtcB AA_kinase

Other DBs

NCBI-ProteinID:

AYL97751

UniProt:

A0A494VUN1

Position

complement(5267915..5269315)

AA seq 466 aa
MGNLRTKDLSKIGYHNDQLRSLVIGIASKNFKHHSKQQLLDLLVEIKNNPEAFLDDELTA
KIAQKVIGKVDGPAFKAYELRDEPVFCKTYGGKGIETSAKKQMELANLLPVSVQGALMPD
AHMGFGLPIGGVLATDNSVIPYAVGMDIGCRMALSIIDESDGFLKRFDYQIKQALKNHTH
FGMEGGLDARQEHEVLDNKLFYEMQLLRPLHSKAVRQLGTSGNGNHFVEFGEIELLADNT
LGLPAKKYTALLSHSGSRGLGSAIARHFTQIAMNTCKLPRHAQQLAWLDLNTEAGQEYWL
AMTLAGDYAKACHERIHANLLKALGLQALHTVENHHNFAWKDTLANGKEVIVHRKGATPA
HQGELGIIPGSMTTSAYLVAGKGVGDALYSASHGAGRAMSRQKAKDSMTVSAMKKLLSGA
GVTLIGGTVEENPLAYKDIETVIAAQHDLIDIQGKFFPRIVRMNKE

NT seq 1401 nt +upstreamnt +downstreamnt
atgggcaatttaagaacaaaagatttaagtaaaataggctatcataatgaccagctgcga
agcctggtgattggcatcgcctcaaaaaactttaaacaccacagcaagcagcaactgctt
gacctgttggtggaaataaaaaacaacccggaagcttttctggatgatgagcttaccgcc
aaaattgcgcagaaagtaattggcaaggtagatggacctgcgtttaaagcgtatgaactg
cgtgatgagcccgtattttgcaaaacctacggcggcaaaggcatcgaaacatcggccaaa
aaacaaatggaactggccaaccttttgccggtaagcgtacagggcgcgttgatgcccgat
gcacatatgggtttcgggctgcctataggcggtgtactggctactgataactcggtgatc
ccgtacgcggtagggatggatattggctgcaggatggcgttatctattattgatgaaagc
gatggctttttgaaacgtttcgattatcagattaagcaggccctgaaaaatcatacccat
ttcggtatggaaggaggcctggatgcaagacaggagcatgaggtgctggataataagtta
ttttacgaaatgcaattattaaggcccctgcacagcaaggcggtaaggcagttaggtaca
tcaggcaatggcaatcattttgttgagtttggtgagatagaactgttggcagataatact
ttaggcttacctgctaaaaagtatacagcattattaagccactcgggtagccggggatta
ggctcggccatagcaaggcattttacgcaaatagccatgaacacctgtaaactgccccgc
catgcgcagcaactggcctggcttgatttaaacaccgaggcgggccaggaatactggctg
gcgatgaccctggccggcgattatgccaaagcctgccacgagcgtatccacgccaacctg
ctaaaagcgctgggtctacaggctttgcacacggttgaaaaccatcacaattttgcttgg
aaggatacattggctaacggtaaagaagtgatagtgcaccgcaagggagcaaccccggca
caccagggcgagctgggcattattcccggcagcatgaccacatcggcttaccttgtagcg
ggcaagggagtgggcgatgctttgtattcggcgtcgcatggcgcgggccgggccatgagc
aggcagaaggctaaggacagcatgaccgtttcggccatgaaaaagctgctgagcggcgcg
ggagttacgctgattggtggcactgttgaggaaaacccattagcctataaggatatcgaa
actgtaattgccgcccagcacgacttgattgacatacaaggcaaattttttccgcggatt
gtacgaatgaataaggagtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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