KEGG   Pseudoduganella umbonata: FCL38_08220
Entry
FCL38_08220       CDS       T06138                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
mum  Pseudoduganella umbonata
Pathway
mum03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mum00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FCL38_08220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mum02044]
    FCL38_08220
Secretion system [BR:mum02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FCL38_08220
SSDB
Motif
Pfam: T6SS_HCP Hus1 DcaP
Other DBs
NCBI-ProteinID: QCP10417
Position
complement(2030529..2031008)
AA seq 159 aa
MILLKFAKPIKGTSTVAGHAEWITIDSIEMGVGRAISSSGGGADRDTSNPSFSEISLSKA
TDIASADLFMQAVCGMSLGKAELHFIHTGGADKKEQVFLKIELEEAIVSSYSVSSGGERP
SENFSINFTKISYQYDSFTGDKVVTGTPKKWDLETNATF
NT seq 480 nt   +upstreamnt  +downstreamnt
atgatcctgctgaaattcgccaagcccatcaagggcacgtccacggttgccggccacgcc
gagtggatcaccatcgactccatcgagatgggcgtcggccgtgccatctcgagcagcggc
ggcggcgccgaccgcgacaccagcaatccgtcgttctcggaaatctcgctgagcaaggcc
accgacatcgcctccgccgacctgttcatgcaggccgtctgcggcatgagcctcggcaag
gccgagctgcatttcatccataccggcggcgccgacaagaaggaacaggtgttcctgaag
atcgaactggaagaggcgatcgtcagctcgtactcggtcagcagcggcggcgagcgcccg
agcgagaacttctcgatcaatttcacgaagatcagctaccagtacgattcgtttaccggc
gacaaggtcgtcaccggcacgccgaagaagtgggacctggaaaccaacgcgaccttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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