KEGG   Pseudoduganella umbonata: FCL38_09000
Entry
FCL38_09000       CDS       T06138                                 
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
mum  Pseudoduganella umbonata
Pathway
mum00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mum00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    FCL38_09000
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mum01007]
    FCL38_09000
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mum03016]
    FCL38_09000
Enzymes [BR:mum01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     FCL38_09000
Amino acid related enzymes [BR:mum01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   FCL38_09000
Transfer RNA biogenesis [BR:mum03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    FCL38_09000
 Prokaryotic type
    FCL38_09000
SSDB
Motif
Pfam: B3_4 tRNA_synthFbeta tRNA_bind B5 FDX-ACB
Other DBs
NCBI-ProteinID: QCP10552
Position
complement(2224581..2227007)
AA seq 808 aa
MQFSENWLRTMVDPKMSSDELSHLLTMSGLEVEEVEPVAPPFTNVVVGHVREVQKHPNAD
RLNVCQVDVGTGTLLNIVCGAPNVREGLRVACATAGAVLPPGADGKPFEIKVGKLRGVES
QGMLCSARELKLSEDHGGLLELPDDAPVGTDFRDYYALNDLKFTIKLTPNKADCLSVLGV
AREVSALTGSPLNAPASPAAAVTLDEKLPVTIGAPDLCGRFAGRVIRNLNAKAATPDWMK
QRLERSGQRSLSALVDISNYVMLELGRPSHVFDLDKIHGGLEVRWGKAGESLKLLNGNTV
SVDEWVGVVADGEQVESLAGIMGGDATAVSLDTTNVYVEAAFWWPNAIQGRARKYNFSTD
AAHRFERGVDYATIPEHIERITALILEICGTSETRVGPIDDQVVNLPERKPVQLRTARAQ
KVIGVPLTDAVIADIFTRLALPFTVENGVFSVTAPSYRFDIEIEEDLIEEVARVYGFENI
PAKPPVAENTMRIAAENERSIFAVRHQLADLGYQEVVNMSFVEAQWELDFNGNTDPIKLQ
NPIASQLSVMRSSLIGSLVANVRYNVNRKAPRVRAFEVGAVYRRDARVQDGPLTVAGYDQ
PQRVGAIAYGPQADEQWGLPTKDADFFDVKADLEALFAPAQLRFAKLEHPALHPGRAASV
SLDGNVIGFIGELHPRWLQKYDLPKAPVVFEVDAVALQQRSVPAYTEISKFPGTSRDLAL
VVPQTVGAQELLDVFAAAVAGSEHARIVQAIVLFDEYRGAGLASDEKSLAFRFSLQDTQT
TLQDEIVDSLMGTLADAATQKLGARARK
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgcaattctctgaaaactggctccgcacgatggtcgatccgaagatgagttcggatgag
ctgtcccacctgctgacgatgtccggcctcgaagtggaagaagtggaacccgtcgcaccg
ccgttcaccaacgtcgtcgtcggccacgtgcgcgaagtgcagaagcacccgaatgccgac
cgcctgaacgtgtgccaggtcgacgtgggtaccggcacgctgctcaacatcgtgtgcggt
gcgccgaacgtgcgcgagggcctgcgcgtcgcttgcgccacggccggtgccgtgctgccg
ccgggcgcggacggcaagccgtttgaaatcaaggtgggcaaactgcgcggagtcgaatcg
cagggcatgctgtgctcggcgcgcgaactgaagctgtccgaagaccatggcggcctgctg
gaactgccggacgatgcgccggtgggcaccgatttccgcgattactacgcgctgaacgac
ctgaaattcacgatcaagctgacgccgaacaaggccgactgcctgtccgtgctgggtgtg
gcacgcgaagtatcggcgctgaccggttcgcctctgaatgcgcccgccagtcccgctgcc
gccgttacgctggatgaaaagctgccggtcacgatcggcgcgccggacctgtgcggccgc
tttgccggccgcgtgatccgcaacctgaacgcgaaggccgcgacgccggactggatgaag
cagcgcctcgagcgcagcggccagcgttcgctgtcggcactggtcgacatctcgaactac
gtgatgctggaactgggccgtccttcacacgtcttcgacctggacaagatccatggcggc
ctcgaggttcgctggggcaaggcgggcgaatcgctcaagctgctgaacggtaataccgtt
tctgtcgacgaatgggtcggcgtggttgccgatggtgaacaggtcgaatcgctggccggc
atcatgggcggcgacgccaccgccgtgtcgctcgacacgaccaatgtctatgtggaagcg
gcattctggtggccgaatgccatccagggccgtgcccgcaagtacaacttctcgaccgat
gcggcgcaccgcttcgagcgcggcgtcgactacgcgacgatcccggagcatatcgaacgc
atcaccgcgctgatcctggagatctgcgggacgtccgagaccagggtcgggccgatcgac
gaccaggtcgtcaacctgcccgaacgcaagccggtacagctgcgcaccgcgcgcgcccag
aaagtgatcggcgtgccgctgaccgatgccgtcatcgccgacatcttcacgcgcctggcg
ctgccgtttaccgtcgagaacggcgtcttcagcgtcacggcgccgagctaccgcttcgac
atcgagatcgaggaagacctgatcgaggaagtagcgcgcgtgtacggcttcgagaacatc
ccggccaagccgccggtggccgagaacacgatgcgcatcgccgcggagaacgagcgctcg
atcttcgccgtgcgccaccagctggccgacctgggctaccaggaagtggtcaacatgagc
ttcgtggaagcgcagtgggaactggatttcaacggcaataccgatccgatcaagctgcaa
aatccgatcgccagccagttgtccgtgatgcgctcgtcgctgatcggcagcctggtcgcg
aacgtgcgctacaacgtcaaccgcaaggcgccgcgcgtgcgtgcattcgaggtgggggcg
gtctaccgccgcgacgcccgcgtgcaggacggtccgctgacggtggccggctacgaccag
ccgcagcgcgtcggcgccatcgcctacggcccgcaggcggacgagcagtggggactgcca
accaaggatgccgacttcttcgacgtcaaggccgacctggaagcgctgttcgcgcccgcc
cagttgcgcttcgccaagctggagcatccggcgctgcatccggggcgcgccgcgtccgta
tcgctggacggcaacgtgatcggcttcattggcgagctgcacccgcgctggctgcaaaag
tacgatctgccgaaggcgcccgtcgtgttcgaagtggatgctgttgcattgcaacaacgt
tcggtaccggcctacacggaaatctcgaagttcccaggcaccagccgcgaccttgccctg
gtggttccgcaaacggtgggagcccaggaattgctggacgtcttcgccgccgcggtcgcc
gggagcgagcatgcgcgcatcgtgcaagccattgttttgtttgatgaataccgcggcgcc
gggcttgcgtcggacgagaaatcacttgctttccgctttagcttgcaagatactcaaaca
accctgcaggacgaaatcgtcgatagtttgatgggtacgctggctgatgcagccacgcaa
aaactcggcgcgcgagcacgcaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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