KEGG   Pseudoduganella umbonata: FCL38_13990
Entry
FCL38_13990       CDS       T06138                                 
Name
(GenBank) response regulator transcription factor
  KO
K07689  two-component system, NarL family, invasion response regulator UvrY
Organism
mum  Pseudoduganella umbonata
Pathway
mum02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FCL38_13990
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:mum02022]
    FCL38_13990
Two-component system [BR:mum02022]
 NarL family
  BarA-UvrY (central carbon metabolism)
   FCL38_13990
SSDB
Motif
Pfam: Response_reg GerE HTH_7 HTH_40 HTH_23 Sigma70_r4_2 TadZ_N HTH_38 HTH_28 TnsD Cadherin_2 HTH_24 B12-binding HTH_20 DUF3071
Other DBs
NCBI-ProteinID: QCP11404
Position
3390425..3391072
AA seq 215 aa
MSDKAAIKVFIADDHAIVREGLKQILADTRDIVVSGEAENGSDALRLFRKSGCHVVLLDI
SMPDRSGIEVLKQIKKEKPELAVLMLSMHREDQYAIRSLKAGAAGYLTKQSAPKELVTAI
RQVAGGLKYISPALAQELANHVGEDHEAAPHETLSDREYQTLTLIASGMTVGAIAKELSL
SVKTVSEYRSRLLVKMKLKNSAELTHYAIRNGLID
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagcgacaaggcagccatcaaggttttcatcgccgacgatcacgcgatcgtgcgcgag
ggcctgaagcagatcctcgccgatacccgcgacatcgtggtctccggcgaggcggaaaac
ggcagcgatgcgctgcgcctgttccgcaagtcgggctgccacgtggtgctgctcgatatc
tcgatgcccgaccgcagcggcatcgaggtgctgaaacagatcaagaaggaaaagccggaa
ctggccgtgctgatgctgtcgatgcaccgcgaggaccagtacgcgatccgctcgctgaag
gccggcgcggccggctatctgaccaagcagagcgctcccaaggaactggtcaccgcgatc
cgacaagtcgctggcgggttaaaatacatcagccccgcgctggcccaggaactggccaac
cacgtgggcgaggaccacgaagcggcaccgcacgaaacgctgtccgaccgcgagtaccag
acgctgacgctgatcgcctccgggatgacggtgggcgcaatcgccaaggaactgtcgctg
tcggtcaagacggtcagcgaataccggtcgcgcctgctggtcaagatgaaactgaagaac
agcgccgaactgacgcactacgcgattcggaacggtttgattgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (15)   
   Pfam (15)   
All databases (21)   

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