KEGG   Pseudoduganella umbonata: FCL38_28790
Entry
FCL38_28790       CDS       T06138                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
mum  Pseudoduganella umbonata
Pathway
mum01501  beta-Lactam resistance
mum01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:mum00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FCL38_28790
   01503 Cationic antimicrobial peptide (CAMP) resistance
    FCL38_28790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mum03036]
    FCL38_28790
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mum02000]
    FCL38_28790
   01504 Antimicrobial resistance genes [BR:mum01504]
    FCL38_28790
Chromosome and associated proteins [BR:mum03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    FCL38_28790
Transporters [BR:mum02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   FCL38_28790
Antimicrobial resistance genes [BR:mum01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    FCL38_28790
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 OEP CusB_dom_1 Biotin_lipoyl FOG1-like_PR
Other DBs
NCBI-ProteinID: QCP13967
Position
6842978..6844126
AA seq 382 aa
MLRNTLIALAVATSLVACGKPPGAPDAAAKGEDKKTTRLLIAPEDLLTVHSNALAAGPVI
TGSIQPERRADLRAEISAIVLQVLKENGEPVRKGDLLVRLDDTSIRDSLASSEEGVRNAK
QVVDQAQRMLERNKTLRASGMTSMQALEDAEVRLNTAQSELAAAKARAVQARQQLDRTLV
RAPFDGIVSERKVSSGDTAQIGKELIKVIDPNSMRFEGLVSADKIGVVKVGQPVLFRVNG
YPGQNFQGKVRRVDPAANAVTRQVEVLVDFAGTSQPRVAGLYAEGRVESETSDALMLPES
AMVQAGDDRYVWRVKDNKLAKVSLAIGSRDERTGQWQVTKGLAAGDTVLRAPGSTVQDGQ
PVQLTAAKNVASASGNAANKGN
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgttgcgaaataccttgatcgctctcgccgtcgccacgagcctcgtcgcctgcggaaaa
ccacccggtgcgcccgatgcggccgcgaaaggggaggataagaagaccaccaggcttctg
atcgcaccggaagatctgctgacggtgcacagcaatgcactggccgccggtccggtgatc
accggctcgatccagccggaacgccgtgccgacctgcgcgccgaaatctcggccatcgtg
ctccaggtattgaaggaaaacggcgaaccggtcaggaaaggcgacctgctggtgcgcctg
gacgatacgtcgatccgtgacagcctggcatcgagcgaggaaggcgtgcgcaacgcgaag
caggtcgtcgaccaggcccagcgcatgctggagcggaacaagacgctgcgcgcgtcgggc
atgacgtcaatgcaggcgctggaagatgccgaagtgcgcctgaataccgcgcaaagcgaa
ctggcggccgccaaggcgcgtgccgtgcaggcccggcagcagctggaccgcacgctggtg
cgcgcgccgttcgacggcatcgtcagcgagcgcaaggtgtcgagcggcgacaccgcccag
atcggcaaggaattgatcaaggtgatcgacccgaacagcatgcgcttcgaaggcctggtg
tcggccgacaagatcggcgtcgtcaaggtgggccagccggtgctgttccgtgtcaatggc
tatccgggccagaatttccagggcaaggtgcggcgcgtggatccggctgcaaacgctgtc
acgcgccaggtcgaagtgctggtcgacttcgccggcacgtcgcagccgcgcgtggccggc
ctgtatgcggaaggccgcgtcgagagcgaaacgtcggatgcgctgatgctgcccgagtcg
gcgatggtgcaggccggcgacgaccgctatgtgtggcgggtgaaggacaacaagctggcc
aaggtgagcctggcgatcggctcgcgcgacgagcgcaccggccagtggcaggtcaccaaa
ggcctggccgccggcgacacggtgctgcgcgcacccggctcgaccgtgcaggacggccag
cccgtgcagctgaccgcggcgaagaacgttgcgtccgccagcggcaatgccgccaacaaa
ggcaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system