KEGG   Meriones unguiculatus (Mongolian gerbil): 110548088
Entry
110548088         CDS       T05884                                 
Symbol
Prpf19
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
mun  Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03040  Spliceosome
mun04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110548088 (Prpf19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110548088 (Prpf19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mun03041]
    110548088 (Prpf19)
   04121 Ubiquitin system [BR:mun04121]
    110548088 (Prpf19)
   03400 DNA repair and recombination proteins [BR:mun03400]
    110548088 (Prpf19)
Enzymes [BR:mun01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110548088 (Prpf19)
Spliceosome [BR:mun03041]
 Complex B
  Other components
   Prp19 complex
    110548088 (Prpf19)
 Complex C
   Prp19-CDC5 complex
    110548088 (Prpf19)
Ubiquitin system [BR:mun04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110548088 (Prpf19)
DNA repair and recombination proteins [BR:mun03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110548088 (Prpf19)
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 U-box eIF2A PROPPIN Cytochrom_D1 RMC1_N zf-Nse Nup160 DUF1830
Other DBs
NCBI-GeneID: 110548088
NCBI-ProteinID: XP_021491762
Position
1:29092024..29102919
AA seq 523 aa
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWGWPSSLALPQSSQWPTPSQDAVMLHSFTLRQQLQTTRQ
ELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMD
LGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASI
PGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFS
ASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL
TKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFS
ENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYI
CKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtccctgatctgctcgatctccaacgaagtgccagagcacccatgcgtgtcccctgtt
tctaaccatgtgtatgagcggcgactcattgagaagtacattgcagagaatggcacagat
cccatcaacaaccagcctctctcagaggagcagctcatcgatattaaagttgctcaccca
atccggcccaagcctccctctgccacaagcatcccagccattctgaaagccttgcaggat
gagtggggctggccgagttctctggctctcccccagtcctcacagtggcctaccccctcc
caggatgcagtcatgctgcacagcttcactcttcgccagcagctgcagacaacccgccag
gagctgtcccatgctctgtaccagcacgatgctgcctgccgagtcattgcccgactcacc
aaggaagtcactgctgctcgagaagctttggctactctgaaaccacaggctggtcttatt
gtacctcaggctgtgccaagctcacagcccagtgttgtgggtgcaggagagcccatggat
ttgggtgaactggtgggaatgactcctgagattatccagaagcttcaagacaaggccact
gtgctaaccacggagcgtaagaagagaggaaaaactgtgcctgaagagctggtgaaacct
gaagagctcagcaagtaccggcaggtggcatcccatgtggggctacacagtgctagcatt
cctgggatcctcgctctggacctctgtccctcagacaccaacaagattctcactggtggg
gcagataaaaatgttgttgtctttgataagagtactgaacagatcctggccactctgaaa
ggccataccaagaaggtcaccagtgtggtatttcatccttctcaggaactggtgttttct
gcgtcccccgatgcaactatcaggatttggtcggtcccaaacacctcttgtgtacaggtt
gttcgggcccatgagagcgcggtgacaggcctcagcctccatgctactggagactatctc
ctgagctcctctgatgatcagtactgggccttctctgacatccagacagggcgtgtgctc
accaaggtgacagatgagacttctggctgctctctcacctgtgcacagttccaccctgat
ggactcatctttggaacaggaaccatggattcccagatcaagatctgggacttaaaggag
cgtaccaatgtggccaacttccctggccactctggccccattaccagcatcgccttctct
gagaatgggtactacctggccacagcagctgatgactcttcagtcaagctctgggactta
cgcaagctgaagaacttcaagacattgcagctggacaacaactttgaggtgaagtcactg
atctttgaccagagtggtacctacctggcgcttgggggtacagatgtccagatctacatc
tgcaaacagtggacagagattcttcactttacagagcatagcggcctgaccactggagtg
gcctttgggcaccacgccaaattcatcgcttcaactgggatggacaggagcctcaaattc
tacagtctgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (28)   

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