KEGG   Meriones unguiculatus (Mongolian gerbil): 110549274
Entry
110549274         CDS       T05884                                 
Symbol
Col5a1
Name
(RefSeq) collagen alpha-1(V) chain isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
mun  Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mun00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    110549274 (Col5a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mun00536]
    110549274 (Col5a1)
Glycosaminoglycan binding proteins [BR:mun00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110549274 (Col5a1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 110549274
NCBI-ProteinID: XP_021494005
Position
8:70543746..70693912
AA seq 1840 aa
MDVHTRWKAARPGAPLLSPPLLLLLLLLWAPPPSRAAQPTDLLEMLDFYNLPSGVTKTTG
FCTTRRSSSEPDVAYRVSKDAQLSMPTKQLYPESDFPEDFSILTTVKAKKGSQAFLVSVY
NEQGIQQVGLELGRSPVFLYEDHTGKPGPEEYPLFPGINLSDGKWHRIAISVYKKNVTLI
LDCKKKIMKFLNRSDHPIIDVNGIIMFGSRILDDEIFEGDIQQLLFVSDHRAAYDYCEHY
SPDCDTAVPDTPQSQDPNPDEYYPEGEGETYYYEYPYYEDPEDPGKEPAPTQKPVEAARE
TTEVPEEQTQPPPEAPTAPETSDTAGKEDDPGIGDYDYVPTDDYYTPSPYEDFGYGEGVE
NPEQPTNPDSGAEIPTSTTVTSNTSNPAPSPEEGRDDLGGEFTEETIKNLEDNYYDPYFD
PDSDSNVSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAG
LPGPPGTTGPTGQMGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPM
VSAQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQG
PPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPG
EDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPG
PPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQG
PPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRG
EDGPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKG
GRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTG
FPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPG
PPGPPGEQGLPGVTGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEG
PPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGVPGEKGPQGPAGRDGLQG
PVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPAGADG
EPGPRGQQGLFGQKGDEGSRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRG
PSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGEAGPSG
AAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPG
PTGEPGPSGPPGKRGPPGPTGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDG
LRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQG
EKGDRGLPGPQGSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAG
HPGLPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGAGDSYVDYADGMEEIFGSLNSL
KLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGS
TCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASA
HQNITYNCYQSVAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKT
VLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFLG
NT seq 5523 nt   +upstreamnt  +downstreamnt
atggacgtacacacccgctggaaagctgcgcgcccaggcgccccgctgctgtccccgccg
ctgctcctactcctgctgctgctgtgggcgccgcctccgagccgcgcagctcagccaaca
gaccttctggagatgctagacttttacaatttgccctcgggggtaacgaaaaccacaggt
ttctgtaccactcgacggtcttccagcgagccggatgttgcctaccgagtctctaaagat
gcacaactcagcatgcccaccaagcagctgtaccctgagtctgactttcctgaggacttc
tccatcctgaccaccgtgaaagccaagaaaggcagccaggccttcctagtctccgtttac
aatgaacagggcatccagcaggtggggctggagctgggccggtcccctgtcttcctctat
gaggaccacacggggaagccggggcctgaagagtatccactcttcccaggcatcaacttg
tcggatggcaagtggcaccgaattgctatcagtgtctacaagaaaaatgtcactttgatc
cttgactgtaagaagaagatcatgaagttcctcaaccgcagtgaccaccccataatagat
gtcaatggcatcatcatgtttggctcccggattctggatgatgaaatatttgagggtgac
atccaacagttgctcttcgtctccgaccaccgggctgcctatgattactgtgagcactac
agccctgactgtgacaccgccgtccctgacacgcctcagtcacaggaccctaacccagat
gaatattacccagaaggagaaggtgagacctattattatgagtacccatattatgaagac
cctgaagacccagggaaggagcctgcccccacgcagaagccagtggaagctgccagagaa
accacagaggttcctgaggagcagacccagcccccaccagaagctcccacggcacctgag
accagcgacacggccggcaaggaggatgaccccggaatcggggactacgactatgtgccc
actgatgactactacacgccctccccatatgaagactttggctatggcgagggcgtggag
aaccccgaacagcccaccaaccctgactcgggagctgagatccccaccagcaccaccgtt
acctccaacacttctaatccagctccgtctcctgaggaagggagagatgacttgggtggt
gagttcactgaggaaaccatcaagaatctggaggacaactactacgacccttactttgac
cctgactccgactccaatgtctccccatcagagatagggccaggcatgccggctaaccag
gacaccatctatgaggggattggaggacctcgaggtgagaaagggcaaaagggagaacca
gccatcattgaaccgggaatgctgatagagggacctcctggcccggaaggccctgctggt
cttccaggacctccaggaactacaggtcctactggccaaatgggtgaccccggagaaagg
ggtcctccagggcgcccaggtcttcctggggctgatggcttgcccggtcccccaggaacc
atgctcatgctgccattccggtttggaggcggtggcgatgctggttctaagggccctatg
gtctctgcccaggagtcccaagcccaggctatcctccagcaggccaggttggcgctgagg
ggaccagctggtccaatgggtcttactgggagacctggccccatgggtcctcctgggagc
ggaggtttgaaaggtgagccaggagacatgggacctcagggtccgcgaggtgtgcaaggc
ccacccggcccgacggggaagcctggaagacggggccgtgctgggagtgatggagccaga
ggcatgcctggacaaacaggccccaagggtgaccgtggctttgatggtctggctgggctg
ccaggagagaagggccacaggggtgaccctggtccttctggcccgccgggacctccagga
gaagatggagaaaggggtgacgatggagaagttgggcccagggggctgcccggggagcct
ggaccacgtggtctgcttgggccaaaaggacctcctggccctcctggccctcctggtgta
accggtatggatggccagcctggcccaaaaggaaatgtgggtccccagggagagcctgga
cccccaggacagcagggtaatcctggtgcccagggtcttccgggtccccagggcgccatc
ggtcctccaggagaaaagggtcctttggggaaaccaggtctcccaggaatgcctggtgct
gatggacccccggggcaccctggcaaagaaggtcctccaggagagaaaggaggccagggt
cctcctggcccccagggtcccattggctacccaggtcctcgaggagttaagggggcagat
ggcatccggggtctgaagggcaccaagggggagaagggtgaagacggtttccctggcttt
aaaggcgacatggggataaagggtgaccggggggagattggcccacctggtccccgagga
gaagatggtcctgaaggcccaaagggtcgtggtggtcccaatggtgatcctggtcctctg
ggacccactggggagaagggaaagcttggagtgccaggattaccggggtacccaggaaga
caagggccaaagggctctattggattccctggcttcccgggtgccaacggagaaaagggc
ggcaggggaacacctggaaagccaggaccacggggacagcgaggcccaacgggcccgagg
ggtgaaagaggcccacggggcatcacagggaagcctggccctaagggcaactccggaggc
gatggcccagccggccctcctggcgagcggggacccaatggaccccaaggtcccaccggc
ttccctgggcccaagggtcccccgggcccaccaggcaaggacgggctccctggacatcct
gggcagagaggcgagaccggtttccaaggcaagactggccccccaggccccccaggagtg
gttggccctcagggtcccacaggagagacgggcccaatgggtgagcgtggccaccctggt
cctccaggccctccaggtgaacagggcctccctggtgtcactggaaaggaagggacaaag
ggtgacccaggccctgctggcctccctgggaaggatggtcctccaggattgcgtggattc
cctggggacagagggctccctggtcctgtgggagcacttggactaaaaggcagcgaagga
ccccctggccccccaggtcctgcgggctctccaggggagagaggcccagctggtgctgct
ggacccatcgggattccagggagacctggtcctcagggacctccaggacctgctggagag
aaaggggttcctggcgagaaaggtcctcaaggcccagctggccgagatggcctccaaggt
cctgtggggcttcctggtccagctggccccgtgggccctcctggagaagatggagataag
ggagagatcggggagccagggcagaaaggaagcaagggggacaagggcgagcagggtcct
cctgggccgacgggtcctcaaggccccatcggacagccaggccctgcgggagcagatggg
gaacctggccctcgtggacagcagggcctgttcggacagaaaggagatgaaggttcaaga
ggtttcccaggacctccaggaccagtgggattacagggtttgccaggacctccaggcgag
aagggtgagacgggagacgtgggccagatgggccctcctggtccaccagggccccgagga
ccctctggagctccaggtgctgatgggccacagggtcctcctggaggaattggcaaccct
ggcgcggtgggagaaaagggagagcctggtgaagctggagagcctggccttccaggagaa
ggaggtcccccgggacctaaaggagaaagaggggagaagggagaggctgggccttctggt
gctgctggacctcctggacccaaaggccctcctggagatgatggtcccaaaggcagcccc
ggccctgtgggctttcccggagatcctggtccccctggagagccaggccccgcaggtcaa
gatggaccacctggtgacaaaggggatgatggtgaacctggacagacgggatccccgggc
cctactggagagcctggtccatctgggcctccaggaaagaggggtcccccaggccccaca
ggccctgaaggcaggcaaggggagaaaggagccaagggagaagccggcttagaaggccct
cctgggaagactggccccatcggcccccaaggggcccctgggaagcctggtcccgatggt
cttcgtgggatccccggtcctgtgggtgagcaaggcctcccaggatcccctggccctgat
ggtccacctggccccatgggtcctccaggactccctggcctcaaaggagactctggtccc
aaaggggaaaagggccatccgggcctgatcggactcatcggacctccgggtgagcaaggt
gaaaagggtgaccgaggactcccaggcccccagggctcatctggtcctaaaggagaacag
ggcatcactggtccttctggcccgcttgggcctcctggtccccctggcttgccgggccct
ccaggtcccaaaggtgctaaaggctcttcgggtcccaccggcccgaagggcgaggcaggc
cacccaggactccctggccctcccggccctccaggcgaggtcatccagcccctgccaatc
caggcatccaggactcggcggaacatcgatgccagccagctcctggacgatggggccggg
gacagctatgtggactatgcagatggcatggaggagatctttggttccctcaactccctg
aagctggagattgagcagatgaagcggccgctgggcacacagcagaatcccgcccggacc
tgcaaggaccttcagctctgccatcctgacttcccagacggcgaatactgggtggatccc
aaccaagggtgctccagggactccttcaaagtctactgcaatttcacagccggaggatcc
acgtgtgtcttccctgacaagaagtctgagggggccagaatcacttcttggcccaaagaa
aacccaggttcctggttcagtgaattcaagcgtgggaaactgctctcctatgtggatgcg
gaaggtaaccctgtgggcgtggtacaaatgaccttcctgcggctgctgagtgcctccgcc
caccagaacatcacctacaactgctaccagtcggtggcctggcaggatgccgccacaggc
agctacgacaaggctatccgtttcctgggctccaacgatgaggaaatgtcttatgacaac
aacccctacatccgtgccctggtggatggctgtgctaccaagaaaggctaccagaagacg
gtgctggagatcgacacacccaaagtggagcaggtccccattgtggacatcatgttcaac
gactttggtgaagcctcacagaaatttggatttgaagtggggccagcttgcttcctgggc
tag

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