KEGG   Meriones unguiculatus (Mongolian gerbil): 110552387
Entry
110552387         CDS       T05884                                 
Symbol
Cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
  KO
K14398  cleavage and polyadenylation specificity factor subunit 6/7
Organism
mun  Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03015  mRNA surveillance pathway
mun03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mun00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110552387 (Cpsf6)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110552387 (Cpsf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mun03019]
    110552387 (Cpsf6)
Messenger RNA biogenesis [BR:mun03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     110552387 (Cpsf6)
SSDB
Motif
Pfam: RRM_1 PRP38_assoc
Other DBs
NCBI-GeneID: 110552387
NCBI-ProteinID: XP_021499320
Position
2:complement(126148912..126180295)
AA seq 589 aa
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLEARIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggcggacggtgtggaccacatagacatttacgcggatgtgggcgaggagttcaaccag
gaagcggaatatggtggacatgatcagatagatctgtatgatgatgtcatctctccatct
gcaaataatggcgatgccccagaagaccgggactacatggatactcttccaccaactgtt
ggtgatgatgtgggtaaaggagcagcacccaacgttgtctatacttacactggaaagaga
attgcattgtatattggaaatcttacttggtggacaacagatgaggacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggacaatccaagggatttgcccttgttggtgttggatctgaagcatcttccaaaaagtta
atggatcttttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgtaat
aaacagttcctgagtcagtttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacctccacctttcccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaagctaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacctttaggccct
ccaggcccacctggtccaccaggacctccacctcctggtcaggttctgccacctcctcta
gcaggacctcctaatcgaggagaccgccctccaccaccagtactttttcctggacaacct
tttgggcaacctccgttgggtcctcttcctcctgggcctccacctccagttccaggctat
ggcccccctccaggtccaccgcctccacagcagggaccacctccacctccaggccccttt
ccacctcgaccaccaggtccactagggcctccccttacacttgctcctcctccacatctt
ccgggaccacctccaggtgccccaccaccagctccacatgtgaatcctgctttttttcct
ccaccaactaatagtggcatgccaacatcagatagtcgaggtccaccaccaacagaccca
tatggccgacctccaccatatgataggggtgactatggtccccctgggagggaaatggat
actgcaagaacaccactgagtgaagctgagtttgaagaaatcatgaatagaaatcgggca
atctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattatgggagt
gctattgaaacattggtaacagcaatttctttaattaaacaatccaaagtatctgcagat
gatcgttgcaaagttcttattagctctttgcaagattgccttcatggaattgagtccaag
tcctatggttctggatcaagaagacgtgaacgatcaagagaaagggaccatagtagatca
cgggaaaagagtcggcgtcataaatctcggagtagagatcgccatgatgattattacaga
gagagaagcagagagcgagagagacaccgcgatcgtgatcgggaccgtgaccgggagcgc
gaccgagagcgagagtaccgtcaccgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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