KEGG   Musa acuminata (wild Malaysian banana): 103972879
Entry
103972879         CDS       T03447                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus04120  Ubiquitin mediated proteolysis
mus04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103972879
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    103972879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mus04121]
    103972879
Enzymes [BR:mus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103972879
Ubiquitin system [BR:mus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103972879
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103972879
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 WD40_like zf-RING_UBOX DUF1664 zf-C3HC4_4 zf-RING_5
Other DBs
NCBI-GeneID: 103972879
NCBI-ProteinID: XP_009385534
UniProt: A0A804K7Y0
Position
Unknown
AA seq 696 aa
MGGSSAGVLVPSVSKADEMGASVTPLAVSSSETTDVAGAPAAEGETVPDGSRDGAAVEAD
AERDRDLLCPICMGVIKDAFLTACGHCFCYMCIVTHLNNKSDCPCCGNYLTKSHLYPNFL
LNKLLKKQCVRQIAKSASPIEHLRVALKQGCEMSVKELDGLLSLLSEKKRRMEQQEAEMN
MQILLDFLHSLRKKKLEELNEVQTDMQFIKDDINAVEKHRTELYRVRERYSVKLRMLFDD
PIPTKLWAPTADQHNSILISNSRNSRSSLVRTGSDNLQIRSNDVTAQLNHQEHQRKDAFS
GSETSSLIQSGRVIARKRKIQAQFKELQECYLQKRRLGASQSHHPKEKVDAKVREGYHVG
LEDFQSILTTFTKYSRLRVIAELRHGDLFHSANIVSSIEFDCDDEYFATAGVSKRIKVFE
FSTVLNQPSEVNCPVVELATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVTTRQSIMEY
EEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWSTKQEASVINIDMKANICCVKYNPGSSV
HVAVGSADHKIHYFDLRNTSSPLCVFKGHWKAVSYVKFLSTNELASASTDSTLRLWDVNG
TCPVRTFVGHTNEKNFVGLTVNNEYIACGSETNEVCVYHKAILTPAARHKFGSWDLDDAE
DDAGLYFISAVCWKSDSPTMLAANSQGTIKVLVLAA
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgggcggctcgtcggcgggagtgctggtgccgtcggtgtcgaaggcggacgagatgggg
gcttcggtcacgccgctggcggtttcgtcatcggagaccacggacgtggccggggctccg
gccgccgagggggagacggtaccggacggatctcgggacggcgcggcggtggaggcggat
gccgagcgcgacagggacctgctctgccccatctgcatgggggttatcaaggatgccttc
ttgacggcctgcggccactgcttctgctacatgtgcatcgtcacccacctcaataataag
agcgattgcccctgctgcggaaattacctcaccaagagtcacctctaccccaatttcctc
ctcaataagctcttgaaaaagcaatgtgtccgtcaaattgcaaaatcagcatcacctatt
gagcatcttcgtgtggcattgaaacagggatgtgaaatgtcagttaaggagcttgatggt
ctgttgtctcttctcagtgagaaaaagcggagaatggagcaacaagaggctgagatgaat
atgcaaattttgcttgactttttacacagtcttaggaaaaaaaagctggaagagctgaat
gaggttcaaactgacatgcaattcatcaaagatgatataaatgcagtagagaaacacaga
acagaactgtacagggtgagagagaggtactctgtcaaattgcgcatgcttttcgatgat
ccaattccaacaaaattgtgggctcccactgctgaccagcataacagcatacttatctcg
aattctcgaaattctcgaagctctcttgtcaggacaggctctgataatttacagattagg
agtaatgatgtgacagctcaactaaaccatcaagagcaccaaagaaaagatgcttttagt
ggttctgaaacaagttcccttattcaatcaggaagagtcatagcaagaaagagaaaaatt
caagcacagtttaaagagcttcaagaatgttacttacaaaagcggcgtcttggagctagt
caatcacatcatccaaaagaaaaagtagatgccaaagtcagagaaggctatcatgtgggt
cttgaggactttcagtctatactaactacatttactaaatacagtcggttgcgtgttatt
gcggaacttagacatggagatctatttcattcagcaaatattgtgtcaagcatcgaattt
gattgtgatgatgagtattttgccactgctggtgtttccaagcgaattaaagtatttgaa
ttttccactgttttgaatcagccatcagaggtaaattgccctgttgtagaattggccact
cggtccaaacttagttgcttgagttggaacaagtattcaaaaaacgttattgcaagtagt
gattacgaagggatagtaactgtttgggatgtaaccactcgccagagcataatggaatat
gaagaacatgaaaaaagagcatggagtgttgatttttcacggacagaaccatcgatgtta
gtttctggtagtgatgattgcaaggtcaaggtgtggtccacaaagcaagaagccagtgtt
atcaatattgacatgaaagcaaatatatgttgtgtcaaatataatcctggatctagcgtt
catgttgcagttggttctgctgatcataaaattcactattttgatttgagaaacactagt
tctccactctgtgtcttcaaggggcattggaaagcagtatcatatgtgaagttcttgtcc
acaaatgagcttgcatctgcatcaacagacagtacattgcgattatgggatgtaaatggc
acatgtccagtgcgcacttttgtaggacacacaaatgagaaaaattttgtgggcttgaca
gtgaacaacgagtacattgcttgtggcagtgagacaaacgaggtttgtgtgtaccataag
gctatcttgacgccagccgcacgacacaaatttggatcatgggatcttgatgatgcggaa
gatgatgctggtttgtattttattagtgctgtttgttggaagagtgacagtcctacaatg
ttggcagccaatagccaggggaccatcaaagttcttgtattagcagcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (10)   
   Pfam (10)   
All databases (46)   

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