KEGG   Musa acuminata (wild Malaysian banana): 103973778
Entry
103973778         CDS       T03447                                 
Name
(RefSeq) polyadenylate-binding protein 2-like isoform X1
  KO
K13126  polyadenylate-binding protein
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03015  mRNA surveillance pathway
mus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103973778
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103973778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    103973778
   03041 Spliceosome [BR:mus03041]
    103973778
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103973778
   mRNA cycle factors
    Stress granule specific factors
     103973778
Spliceosome [BR:mus03041]
 Complex C
  Other components
   Complex C specific factors
    103973778
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_occluded RRM_3 MARF1_RRM1 NSRP1_N BRAP2
Other DBs
NCBI-GeneID: 103973778
NCBI-ProteinID: XP_009386705
UniProt: A0A804JK15
Position
Unknown
AA seq 658 aa
MAQAPMQHQAPNGTVDNNIASAGGGHSSPTSLYVGDLHGSVTDAQVYDLFSQIGPLLSVR
VCHDVNTHRSLGYAYVNFINPADAATALDVLNFTPLNNKPIRIMYSNRDPSIRRSGAANV
FIKVQCNLNLDKEIDNKALHEIFSSFGSILSCKVATDASGQSKGYGFVQFDQEEAAQNAI
NKLNGMLVNDKPVFVGPFVRKQERENSLDKTKFCNVFVKNLSESTTKEDLENIFGKYGKI
TSAVVMREEDGKSKCFGFINFENPDAAARAVQELNGHKFDDKEWYVGKALKKSERELELK
EKFDRNAKETMDKYQGLNLYLKNLDDSIGDDELRELFSGFGMITSCKVMREPNGISKGSG
FVAFSAPDEAARALTEMNGKMVCGKPLYVAPAQRKEDRRAKLQAQFSQVRPVAMVPTAGT
RFPMYPPGAPGVGQHIFYGQAPPGLIPPQPGFGFQQQLIPGMRPTGAPMPNFLVPLVQQG
QQMHRPGGRRSGVGPRQQMQQSMPLVQQQQMFPRGRVQRYPPGRNMPDIPIPGVVGGMLS
PYDMGGLPMRDAPMSQPIPIGALASALANATPEQQRMMLGENLYPLVEQLEHDHAAKVTG
MLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVAQQHQANAPTDQLAALSLNDGLVS
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcgcaggctccgatgcagcatcaggcgccgaacgggacggtcgacaacaatatcgcc
tccgccggcgggggccactcctcgccgacgtcgctgtacgtgggtgacctgcacgggagc
gtgacggacgcgcaggtctacgatctgttcagccagatcggccccttgctgtcggtccgg
gtctgccatgacgtcaatacgcaccgatctctcggctatgcttatgtcaactttattaac
cctgccgatgctgctacggcattggatgtgctgaactttaccccacttaacaacaagcct
attcgcatcatgtattcgaaccgtgaccctagtatccgcagaagtggagcagcaaatgtt
ttcattaaggtacaatgcaatttgaatttggataaagaaatagacaacaaggcactacat
gagatattttcgtcttttggtagtattctctcctgcaaggtcgcaacagatgcatctggc
caatcaaaaggctatggttttgttcaatttgatcaagaagaggcagcacagaatgcaatt
aataagctaaatggcatgcttgtcaatgataaaccggtttttgttggaccgtttgttcgc
aagcaggaaagggaaaattctttagacaagacaaaattttgtaatgtctttgtcaaaaat
ctatcagagtcgactacgaaggaagatctagaaaacatatttggcaagtatggcaaaata
accagtgctgttgttatgagggaggaagatggaaaatcaaaatgctttgggttcattaat
tttgagaacccggatgctgctgcccgagcagtacaagaactcaatgggcataaatttgat
gataaggaatggtatgttggaaaggcacttaagaaatctgaaagggaactggaactgaaa
gaaaagtttgatcggaatgcaaaggagacaatggacaaatatcaaggtcttaacttatat
ttgaagaacttggatgatagcattggagatgatgaactgagagaactcttttctggtttt
ggtatgattacttcttgcaaggttatgcgggaacctaatggtataagtaaaggttctgga
tttgttgctttttcggctcctgatgaagcagctcgagctctcacagagatgaatgggaag
atggtctgcgggaagccactttacgttgcacctgcacagcgtaaagaagatagaagagct
aagttgcaggcacagttttcacaagtacggccagtagcaatggtgcctactgctggtact
cgttttcccatgtacccccctggtgctcctggtgtggggcaacatatattttatggtcaa
gcacctcctggccttattccaccacagcctggatttggtttccaacaacagcttattcct
ggaatgcggcccacaggggcacctatgccaaatttcttagtgcccctagtccaacaaggt
cagcagatgcatcgcccaggaggtaggcgttctggagtaggacctagacaacaaatgcag
cagtctatgcctctagttcagcaacagcagatgtttccaaggggccgtgtccagcgctac
cctcctggacgcaacatgcctgatattccaataccaggtgttgttggagggatgctatct
ccctatgacatgggaggtttgcccatgcgagatgctcctatgtcacaacctattcccatt
ggggcattggcttcagcccttgcaaatgctactcctgagcagcaaaggatgatgctgggt
gagaatctgtacccactagttgagcaactcgaacatgatcatgcagccaaagttacaggg
atgctactggagatggaccagaccgaggtcctgcatctgctggaatctccagatgccctg
aaagcgaaagttgcagaggcaatggaagttctgaggaacgtcgcacagcagcatcaggct
aatgcccccactgatcagttggcggcgttgtccctgaatgatggccttgtttcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (58)   

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