KEGG   Musa acuminata (wild Malaysian banana): 103977575
Entry
103977575         CDS       T03447                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03420  Nucleotide excision repair
mus04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103977575
  09124 Replication and repair
   03420 Nucleotide excision repair
    103977575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:mus03051]
    103977575
   03400 DNA repair and recombination proteins [BR:mus03400]
    103977575
Proteasome [BR:mus03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103977575
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103977575
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD Rad60-SLD_2 Dsc3_N TECR_N UBA_3 SOG2
Other DBs
NCBI-GeneID: 103977575
NCBI-ProteinID: XP_009391404
UniProt: A0A804I9G3
Position
3:complement(5074605..5086311)
AA seq 409 aa
MKIFVKTLKGTNFEIDVKPEDTVAAVKRYIETSQGKTVYPAEQQMLIHQGKILKDDTTLD
ENKVCESTFLVIMLSKTKGSSSGASTTVQAPATQTKGSSSGASTTVQAPASQAPPTNTAP
PVPSAQASAPSQAPSATLPFVPASTPAPTAAAAATPVATISSEVDAYGQAASNLVAGNTL
EQTIQQILDMGGGTWARDTVVRALRAAYNNPERAVEYLYSGIPENAEAPPVARAPASEQT
TNAPAQAPQPVQAAVPSGGPNANPLDLFPQGLPNVGSNAGGGSLDFLRNSPQFRALQALV
QANPQILQPMLQELGKQNPQIMRLIQEHQGEFLRLINEPAEGTEGNPLGQLAGGMPQTLN
VTPEEREAIERLEAMGFDRALVLQVFFACNKNEELAANYLLDHMHEFED
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgaagatcttcgtcaagactctcaagggcactaacttcgagatcgatgtgaagcccgag
gacacggttgctgctgtgaaaagatatatcgagacgtctcaaggaaaaactgtttaccca
gctgaacagcagatgcttatacatcaagggaagattcttaaagatgatactacactggat
gagaataaagtttgtgaaagcacttttcttgttataatgctgagtaagactaagggttca
tctagtggagcatcgaccactgtacaagctcctgcaactcagactaagggctcatctagt
ggagcatcgaccactgtacaagcacctgcaagtcaggctccacctactaatactgcacct
cctgtcccttcagcacaagcatctgctccatctcaagcaccttcagcaacattgcctttt
gtacctgcaagtacaccagctccaactgctgcagctgctgcaactcctgtggctaccata
tccagtgaagtagatgcatatggtcaagcagcatcaaatcttgttgctggtaatacctta
gagcaaaccatccaacaaattcttgacatgggtggggggacttgggccagagacactgtc
gttcgtgccctgcgtgctgcatataacaaccctgaacgggctgttgaatatttatactct
ggtattcctgagaatgctgaagccccaccagttgcacgagcgcctgcaagtgaacaaaca
accaatgccccagcgcaggctccacaaccagttcaagctgcagttccttctggtggtcct
aatgctaatcctttggacctctttcctcagggtctgcccaatgttgggtcaaatgctggt
ggtggaagccttgattttttacggaatagtccacagtttcgagctttgcaggctttggtg
caggcaaaccctcaaatcttgcagcctatgcttcaagagctgggaaaacagaatcctcag
attatgaggcttattcaggaacaccagggagagtttttgcgattgataaatgagcctgca
gaaggaactgagggcaaccctctaggtcagttggctggtggaatgccacaaacgctgaat
gttactcctgaggaacgcgaagccattgagcgtctcgaagcgatgggctttgatcgagca
cttgtgctgcaagtcttctttgcttgcaacaaaaacgaggagcttgctgctaattacctt
ctggatcatatgcatgagtttgaagattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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