KEGG   Musa acuminata (wild Malaysian banana): 103978938
Entry
103978938         CDS       T03447                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mus00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103978938
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mus01002]
    103978938
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mus04131]
    103978938
   04121 Ubiquitin system [BR:mus04121]
    103978938
Enzymes [BR:mus01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103978938
Peptidases and inhibitors [BR:mus01002]
 Metallo peptidases
  Family M67
   103978938
Membrane trafficking [BR:mus04131]
 Endosome - Lysosome transport
  Others
   Others
    103978938
Ubiquitin system [BR:mus04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    103978938
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB Herpes_UL25 DUF3106
Other DBs
NCBI-GeneID: 103978938
NCBI-ProteinID: XP_009393182
UniProt: A0A804IG73
Position
3:complement(24841772..24852215)
AA seq 504 aa
MSAMRPHVRAIDINALAQKVEVDNRISLAFYYRIADNLLKQARIYRDERNLIDLYIILLR
FSSLLCETIPCHHEYQALPPAFRKKLLDVMNELESLKPEVQRQVDNLNREHTFQTAGQKS
VSYSPVPAKEHIVPIPRMDQTSTVSTSRSSWRPAERNRLVLPDNSQADKSLQKISFGVLN
PKEETLSRHSILGPNGLWGPPARPVTGIRVQYPSNFELIQSGSSGLNQDAQSGLVVINEG
DSRKRNYDLESVLSLDDGRWSSIPVEESDTFAASVVQEDFAHLNIKQPSPPPVLAQVESR
VISPSKVADPRPGPAKSSHDGTKTFQNLHVPVKMMEAFMRLAEKNTAKNLETCGILAGLL
KNRMFYVTTLIIPKQESTSDSCQTTDEEEIFNVQDKLSLFPLGWIHTHPTQTCFMSSIDL
HTHYSYQIMLPEAIAIVMAPTDTSRTHGIFHLTDPSGVNLIRNCRESGFHPHEEPLDGSP
IYEHCSHVYMNANMKYDVIDLRNS
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtcggcgatgaggccccacgtgagggcgatcgacatcaacgccctggcccagaaggtg
gaggtcgacaaccgcatctcccttgccttctactaccgcatcgccgataatctcctcaag
caggctagaatttacagggacgagagaaatctcattgatctgtatattatacttctcaga
ttttcgagtcttttgtgcgagacaataccttgtcaccatgaataccaggccttacctcct
gcttttaggaagaaactgttggatgtcatgaatgaactggaatctctgaagccagaagtt
caacgtcaagttgacaatcttaacagagagcatacatttcaaactgctggtcagaaaagt
gtctcctatagtccagttcctgccaaggaacacatcgttcctattcctcgcatggaccag
acttctacagtaagtacatctcgatcgtcatggagacctgctgagaggaatcgacttgtg
ttgccagacaactcacaagcagataaatcattgcagaaaatatcttttggtgtacttaat
ccaaaagaagaaaccttatctaggcattccattttaggtcctaatggtctatggggccct
cctgcacgaccagttactggtataagggtccagtatcccagcaattttgagttgattcaa
agtggaagttcaggcctgaatcaggatgcgcaatctggtttagttgtgataaatgaaggc
gattctagaaagaggaactatgatctggaatcagttctctcccttgatgatggcagatgg
tcttctattccggtagaagaatctgatacttttgctgcaagtgtagttcaagaagatttt
gctcatttgaatatcaagcagccatctcctcctccagttctagctcaagtggagtcacgt
gtgatttccccatcaaaagttgctgatccaagaccaggcccagcaaaatcttcgcatgat
ggaacgaagacttttcaaaatctacatgtgccggtaaagatgatggaagcttttatgcgg
cttgcagagaagaacactgccaaaaatttggaaacctgtggaattcttgcaggtttattg
aaaaacaggatgttttatgtgacaacactaataatcccaaagcaggaatcaacatctgat
tcgtgccaaactacggatgaagaagaaatatttaatgtccaagacaagctctctcttttc
cctcttgggtggatacatacccacccaacccagacttgcttcatgtcatctattgatctc
catactcattattcgtaccagattatgttaccagaagcaattgcaattgtcatggcacca
actgatacatcaagaacccatggcatattccatctgacagatccatcgggtgttaatctg
attcgcaactgtcgagaaagtggattccacccacatgaggagcctctggacggcagtcct
atatacgaacactgttctcatgtttacatgaatgccaatatgaagtacgatgtgatcgat
ctccgtaactcctga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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