KEGG   Musa acuminata (wild Malaysian banana): 103979942
Entry
103979942         CDS       T03447                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X2
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103979942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mus03041]
    103979942
Spliceosome [BR:mus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103979942
 Complex B
    103979942
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 103979942
NCBI-ProteinID: XP_009394487
UniProt: A0A804HPD9
Position
1:5452619..5467516
AA seq 577 aa
MSASDRRRESRSGGGGRDRIAFEERESHRERNSHGSIREKLKMSERSRDRENEGGRDKER
DWDREKERDSSRLGRKERGQDREKERNRDRRRDYERGRSTNDERGRDKFDEWDRFHNRDN
DRQKYDIEKEKRQKHRSRSRSKDRFSKRTKSRSPSPSKSKRTSGFDMAPLGVSDTAIAGS
LPVVPQLVTGTLPTMLPVATHQIGSIALMPAQAVTQQATRHARRVYVGGLPPMANEQTIA
TFFSHVMSAIGGNAAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGVPVK
VRRPTDYNPSLAATLGPSQPSPHLNLAAVGLLPSAIGGSEGPDRVFVGGLPYYFTDAQIR
ELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVTDIACAALNGLKMGEKTLTVRRAT
ASMGQMKPEQELILQQAHEHIAIQKLALQSGGASHFPGFALNANTSAEPPTKVVCLTEVV
SVDELRDEEVYKEILEDMREESEKFGSLINLVIPRPGPTGEVISGVGKVFLEFANVTDSA
RAKVSLHGRRFGGNVVSATYYSEEKFATGDYDAMVVA
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtccgcctctgatcgccgccgcgagagcaggtccggaggtggaggacgcgatcggatc
gccttcgaggagagagaatcccatcgcgagcgcaattctcatggatcaatacgggagaag
ctaaagatgagtgagagaagtcgagatagggaaaatgaaggcggtcgagataaagagaga
gattgggatcgagagaaggaaagagatagtagtcgacttggaagaaaggagagaggtcag
gatcgagagaaagaaagaaatcgggatcgacgtagggactatgaaagaggtagaagcaca
aatgatgagagaggaagggacaaatttgatgaatgggatcgcttccacaaccgtgataat
gatcggcagaaatatgatattgaaaaggagaaaagacaaaaacataggtcacgctcacgt
tcaaaggatagattcagcaagaggactaagtcacgatcaccttctccttctaaaagtaag
cgtacaagtggttttgacatggctcctcttggtgtgtctgatactgccattgcagggtca
ctgcctgttgttccacaacttgtgacaggaactttaccaaccatgttacctgttgcaacc
catcagattggatcaattgcacttatgccagcacaagcggtgactcaacaggcaacaagg
catgcacgccgtgtatatgttggaggcctacctcccatggcaaatgagcagacaattgct
acattttttagccatgtaatgtctgccataggaggaaatgctgcaggtccaggtgatgct
gttgtcaatgtatacataaatcacgaaaagaaatttgcttttgtggagatgagatcagta
gaagaagcaagtaatgcgatggcattagatgggataatttttgagggagttccagtgaaa
gttcgaaggcctacagactataatccttccttggctgcaacacttggacccagtcaaccc
agtccgcatcttaacttagctgctgttggtcttttacccagtgcaattggcggatcggag
ggacccgatcgtgtctttgtgggtgggctgccatactatttcacagatgcacaaataagg
gagctcctagaatcgtttggacccctgcgtggatttgatcttgtaaaagatagagacaca
ggaaactcaaaaggttatggtttttgtgtctatcaggatccatcagtgactgacattgca
tgtgctgcacttaatggcctcaaaatgggtgaaaagacactaacagtccgacgtgccact
gccagcatgggacagatgaaaccagagcaggagttgatcttacagcaggcacatgaacac
atagctattcagaaactagctttgcaaagtggtggtgcctcgcattttccggggtttgct
ttgaatgccaacacatctgcagaaccgccaaccaaagttgtatgcttaacagaggttgtt
tctgtggatgaactgagagatgaggaggtgtacaaagaaatactagaggacatgagagaa
gaaagtgagaagtttggttctttgataaatcttgtcatacctcgccctggtccaactgga
gaagtgatttctggagtcggaaaggtctttttggagtttgcaaatgtcacggactcggct
agggcgaaagtttccctccatggtagaaggtttgggggaaatgttgtcagtgctacatat
tattccgaagaaaaattcgccacaggagattacgacgcaatggttgtggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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