KEGG   Musa acuminata (wild Malaysian banana): 103984720
Entry
103984720         CDS       T03447                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103984720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    103984720
   03041 Spliceosome [BR:mus03041]
    103984720
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103984720
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103984720
Spliceosome [BR:mus03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103984720
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 103984720
NCBI-ProteinID: XP_009400552
UniProt: A0A804J2K4
Position
5:6832152..6837755
AA seq 444 aa
MDPSYKKRKADENGALATAIPAAELTPEDGRKIIDAFSLDQLRDIVAAAVSRGEPGVLDD
VRAIADRDQSQRKLFIRGLGMETTTDAVRSLFSTYGEIEEAAVIVDRATGKSKGYGFITF
RHIDGALRALKEPSKKIDGRMTVTQLAAAGNSGSGAAPSADVSLRKIYVANVPADMPSDR
LLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYMTVEGAKNSLVDPNKNIDGHNLVCKLA
IEGKKGKPGAPAPGAAPMGGVPGQPMGGGADMGPDGLGLGAQSSLPSSLSSQYGGPGSGL
GSYGGYSGSALPGAAGLSHHHNMNSSLPSSMGPGTPGLSSVGSQVPSSLGGAVAGGYGGG
LGGPLGSSQYGGPGSGGYGGYGMGSSLYRMPPSSVGMPSGGYPEGGHYPLSSSAYQGQHH
QPAGSSPGQRVPGGGLYPNVPPYY
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggacccgtcctacaagaagcggaaggcggacgagaacggcgccctcgccaccgccatc
ccggcggccgaattgacgccggaggatggccgtaaaatcattgacgcattctccctcgac
cagctccgcgacatcgtcgccgccgccgtgtcccgcggcgagcctggcgtcctcgacgac
gtccgcgctatcgccgaccgcgaccagagccagcgcaagctcttcatccgcggcctcggc
atggagaccaccactgacgccgttcgctccctcttctctacgtacggcgagattgaggag
gccgctgttattgttgacagggccaccgggaagagcaagggttacgggttcatcaccttc
cgccatatcgacggtgccctccgtgccctaaaagagccatccaagaagatcgatggccgg
atgacggtcacccagcttgctgctgccggtaactccgggtccggcgctgctccgtccgcc
gatgtctctctccgcaagatctatgtggcgaacgtccccgctgacatgccatctgaccga
ctccttgcccatttctcctcttacggtgagatcgaggagggccctcttgggttcgacaag
cagacggggaaattccggggcttcgccctcttcgtctacatgacagtggagggggcaaaa
aattccctcgtggatcccaacaagaacatcgatgggcataacttggtctgcaagcttgca
atagagggtaagaaggggaagccaggtgcccctgcaccaggtgctgcccccatgggcggt
gtccccggccagcccatgggtggtggtgccgatatgggtccagatgggcttggattgggt
gcacagtcctcattaccaagttctctctctagccagtatggtggtccaggtagcggtctc
ggttcatatggtggttactctggaagtgcgctgccgggtgctgctggactgagtcaccat
cataatatgaactcttccttgccatcatccatgggtcctggcactccaggtctgtcatcg
gttggcagtcaggtgccttcatcgcttggtggtgctgtagctggaggatatggagggggt
ttgggtggccctcttgggtcttctcagtatggtggccctggctccggtggatacggaggt
tatggcatgggctcatcactttatcgtatgcctccaagctcagttgggatgccttcaggt
ggttatccggagggtggacattatcctctgtcatcatcagcataccagggccagcatcac
cagccagcaggatcctctcctgggcagagggttccaggtggagggttatatcctaatgtg
ccaccttattactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system