KEGG   Flagellimonas oceani: GVT53_00630
Entry
GVT53_00630       CDS       T06500                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
mut  Flagellimonas oceani
Pathway
mut00300  Lysine biosynthesis
mut00550  Peptidoglycan biosynthesis
mut01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mut00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GVT53_00630
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GVT53_00630
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mut01011]
    GVT53_00630
Enzymes [BR:mut01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     GVT53_00630
Peptidoglycan biosynthesis and degradation proteins [BR:mut01011]
 Precursor biosynthesis
  Amino acid ligase
   GVT53_00630
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase YqeC DUF3440 CbiA LpxK
Other DBs
NCBI-ProteinID: QII43256
UniProt: A0A6G7IXH4
Position
133550..135013
AA seq 487 aa
MKLLKDILYGVSLSAVSGDTNVMVNQVHFDSRKVEMDDVFVAVRGTVTDGHKFIQKAVDL
GARAIVCEELPQLMVNGVTYLQVDNCNSALAVIASNFYDNPSKNLKLVGVTGTNGKTTVT
TLLYNLFKKAGFKVGLISTIKVLVDDKEFKTTHTTPDVMTINNYLAMMNEVGVEFCFMEV
SSHGIHQKRAEGLHFEGAIFTNLSHDHLDYHKTFAEYRDTKKKLFDGLPKTAFALVNIDD
KNGLVMLQNTRAKKYTYALKTFADYRAQILENQFNGQLLKVDDNELWSRLIGDFNAYNLL
AIYATADILGLEKMEILRLMSELENVDGRFQYYISKDKITAIVDYAHTPDALKNVLVTIN
ALRTGNENVITVVGCGGDRDKSKRPVMGHIASEMSDQAIFTSDNPRTESPTTIIEEMEAG
VEAQNVRKVLSIENRKQAIKTACKLAMANDIILVAGKGHETYQETNGVRVDFDDFKEVKE
ALQSLKK
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgaagttattgaaggacatattatatggagtaagcctctccgcggtgagcggggacacc
aacgtaatggtgaaccaagtgcatttcgattccagaaaggtggagatggacgatgtgttc
gtcgctgttcgtggtacggttaccgatggccataaattcattcaaaaagctgtggattta
ggggcaagggccattgtgtgcgaagagcttccccaacttatggtgaacggcgttacctat
ttgcaagttgacaattgcaatagtgctctggccgtaattgcttccaatttctatgataac
ccctccaagaacctaaaattggtgggtgtaacgggaaccaatggcaagactacggtaacc
acacttttatataatcttttcaaaaaagcaggatttaaggtggggttgatttccaccatt
aaggtattggtagatgacaaggagttcaaaaccacgcacaccaccccggatgtaatgacc
atcaacaattacttggccatgatgaacgaggtcggggtagagttctgttttatggaagtg
agctcgcacggaatccatcaaaaaagagcagaaggactccattttgaaggagccatcttt
accaatttgtcccacgatcatttggattatcataaaacatttgccgagtaccgggacacc
aagaaaaaattgttcgatggattgcccaaaacggcttttgccttggtcaatatagatgac
aagaacggactggtaatgttgcagaacacccgtgccaaaaaatatacctacgcgttaaaa
acctttgccgattacagggcccagattttggaaaaccaattcaacggtcagctgctgaaa
gtggatgacaacgaattatggtctagactcatcggtgactttaatgcctataatttactt
gccatatacgccaccgccgatatccttggactcgagaaaatggagattttgaggttgatg
agcgagttggaaaacgtggatggcaggtttcaatattatatatcaaaagataagataacg
gctattgttgattatgcccatacgccggatgcactaaaaaatgtattggttactatcaat
gcattgaggactggaaatgaaaacgtcatcaccgtagtggggtgtggtggtgaccgtgac
aagtctaagcgtccggttatgggtcatatcgcatccgaaatgagcgatcaggccattttt
acttcggataacccgagaaccgaatctcccacgaccatcatcgaagagatggaggcgggc
gtcgaggcgcaaaatgtccgaaaggtgttgtccatagaaaacagaaaacaggccataaaa
accgcatgcaagcttgcgatggccaatgatattatcctagtggcgggaaaaggccacgag
acctatcaggaaaccaatggtgtccgggtcgattttgatgattttaaagaagtgaaagaa
gctctgcagagcctaaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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