KEGG   Methanosarcina vacuolata: MSVAZ_1852
Entry
MSVAZ_1852        CDS       T03815                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mvc  Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:mvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mvc02048]
    MSVAZ_1852
Enzymes [BR:mvc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     MSVAZ_1852
Prokaryotic defense system [BR:mvc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   MSVAZ_1852
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N DUF4145 Helicase_C HSDR_N_2 SNF2-rel_dom Sec6 SLFN-g3_helicase SAM_KSR1 AAA_19 ERM_helical
Other DBs
NCBI-ProteinID: AKB44121
UniProt: A0A0E3LHE3
Position
2353302..2356742
AA seq 1146 aa
MTNFAFLEAEWPSLYEAAEKASNAVYPDPRTACFYARRALELAVQWIYKYDYSLLLPYQE
NLSALIHEPTFKKVAGEAIFNKARVIIQLGNEAVHSNSSIQAYDSVTAVSELFHITYWLA
RTYARKEKPEPGLSFNPDDLPKTTVPKQTIEQLQNLENSLREKDEKLSLLLADKSAMDEE
LKRLRAEVAKAKEASALQPDTHDYSEAETRKSLIDLLLKEAGWALDKAQDREFEVSGMPN
ESGVGFVDYVLWGDDGKPLALVEAKRTTRDPQVGQQQAKLYADCLEKQFGQRPVIFYSNG
YENWIWDDSSYPPRQVQGFYKKSELELLIQRRSSRRSLSGARINSKIADRYYQSRAIRRI
GESIEQDNDRKALVVMATGAGKTRTVIALCDLLMRCNWVKRVLFLADRVALVNQAVNSFK
RHLPDSAPVNLVTEKDTDGRVFVSTYPTMMKQIEEMNNGQRRFGSGHFDLVIIDEAHRSV
FKKYRAIFDYFDSFLVGLTATPKNEIERNTYSLFDLEPGVPTDAYQLEEAVKDGFLVPPK
AVSVPLKFQRQGINYDDLSDEDKEQWESLDWGDEEGEIPGRVEADAVNKWLFNKDTVDKV
LAHLMERGLKVAGGDRLGKTILFAKNQAHAEYIAERFNASYPHFKGEFARVITFKTEYAQ
SLIDNFSIKEKAPHIAISVDMLDTGIDVPEVVNLVFFKLVRSRTKFWQMLGRGTRLCPDL
FEPGTDKQFFYLFDYCQNLEFFSQNPETTDGSLGDSLGTRLFKSRLELLSVLDRKLESDS
DCEAGAETSEIYGEPKTEAEVRFSVAGMLHSEIASMNLDNFVVRPRRRLVEKYSKPEAWI
KLSSEDLSELSHEIAVLPSELQPEAEEAKRFDLLVLNLQLALLRAEPAFERLTNQVRNIA
GLLEEKSAIPMVRDQMALILDVQTDEWWENVTTPMLESLRRRLRNLVKLVEKHHKKPIYT
DFKDEIGSETDVELPGFAEAGDFEKFRAKTRAFLLEHQDNNVIHKLRMNIPLAAPDLDEL
ERILSESGLGGPEEIVRAREVSNGLGLFVRSLIGLDREAAKQSLATFLTGKTLTANQIEF
INLIINHLTEHGAMDAALLYESPFTDLTPQGPDGLFTSTQIDELIATLEQITATALVPPC
SQQITA
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgaccaattttgcctttctcgaagccgaatggccttctttgtatgaggcagccgaaaaa
gcctcaaatgcggtttatcctgaccctcgcactgcctgtttttacgctcgcagggctctg
gaactggctgtgcagtggatatacaagtacgattattcactgctcctgccgtatcaggaa
aatttgagtgctctcattcatgagcctacattcaaaaaagttgcgggagaggcaatcttc
aacaaagcacgggtcattatccagcttggaaacgaggctgtgcacagcaacagttccatt
caggcatatgattcagtgacagccgtgagtgaacttttccacataacctactggctggca
cgcacctatgcccgaaaagaaaagcctgagcccgggctgagcttcaaccctgacgacctg
ccgaaaacaacagtcccgaagcagacaatagagcagcttcaaaacctggaaaacagcctc
cgggaaaaagacgaaaaactctctctacttctggccgacaaatccgcaatggacgaagaa
ctaaaacgcctgcgtgccgaggttgcaaaggcaaaagaagcttcagccctacagccggac
acacacgactattccgaagctgagacccgaaaaagcctgattgacctcctgcttaaagag
gcaggctgggcccttgacaaagctcaggacagggaatttgaagtctcaggcatgccaaac
gaaagcggggtcggttttgtagactacgtgctctggggcgacgacggaaagccccttgcc
ctcgttgaagcaaagcgcactaccagagacccgcaggtcggccagcagcaggcaaaactc
tacgccgactgcctggaaaaacaattcgggcaaaggcctgtgatcttctattcaaacggg
tacgaaaactggatctgggacgattccagttatcctccgaggcaggtgcagggtttctac
aaaaaatccgaactcgaactccttatccagcggagaagcagccgcaggtctctttctgga
gccagaattaactcaaaaattgcagaccgctactatcagagccgggccatccgccgcata
ggagaatccattgaacaggacaacgacagaaaagccctggtagtaatggcaacaggcgct
ggcaagacccgtacagtcattgcactctgcgatcttctcatgcgctgcaactgggttaaa
cgcgtgcttttcctggccgacagggtagctctggtcaaccaggcagtaaactccttcaag
cggcacctccctgactccgcacctgtgaaccttgtaacggaaaaggacaccgacgggaga
gtgttcgtttcaacctacccgacaatgatgaagcagatcgaagaaatgaacaacggacag
cgccgctttgggtccgggcatttcgaccttgtaattatcgatgaagcgcaccgttctgtt
ttcaagaagtacagggcgattttcgactactttgactctttccttgttggccttacagca
acgcccaaaaatgaaatcgaacgaaatacctacagcctctttgaccttgaacccggcgtt
cccacagacgcctaccagctcgaagaagctgtaaaagacggtttccttgtccctccaaaa
gcagtttcagttcccctgaagttccagcgccaggggatcaattatgacgacctctcagac
gaggacaaggaacagtgggaatctcttgactggggagacgaggaaggcgaaattcctggc
cgtgtagaagccgatgccgtcaacaaatggctgtttaacaaagacaccgtagacaaagtg
ctggctcacctgatggaacggggcctgaaagtcgctggcggtgaccgcctgggcaagaca
atcctctttgcaaaaaaccaggctcacgctgagtatattgccgagcggttcaatgccagt
tatccgcatttcaaaggcgagtttgcccgtgttataactttcaagaccgaatacgcccag
agcctgatagacaacttctctatcaaagaaaaagcccctcacattgccatctcagtggac
atgcttgacacagggatcgatgtgcctgaggtcgtaaatcttgttttcttcaaactggtg
cgttccaggacaaagttctggcagatgttaggacgcggtacccgtctctgtcccgacctt
ttcgaacccggaacagacaaacagttcttttatctttttgattactgccagaacctggag
tttttcagccagaacccggaaaccacagacggttcactgggagattctcttggcacgcgc
ctgttcaagtcacgtcttgaattgctctcagtgcttgaccgaaaacttgaatctgacagc
gattgcgaagccggtgccgagacctcggaaatatacggtgaaccgaaaacggaagccgaa
gtccgcttttcggttgccggaatgctgcacagcgaaattgcctcaatgaacctggacaac
ttcgtagtgcgtccaaggaggaggctggtcgaaaaatactcaaaacccgaagcctggata
aaattatccagcgaagacctctccgagctttcccatgaaatcgcagttcttccctcagaa
ttacaaccggaagccgaggaagcaaaacgttttgatctcctggtcctgaacctgcaactg
gctttactgcgtgccgagcctgcctttgagcgcctgaccaatcaggtaagaaatatcgca
ggtctccttgaagaaaaatcagccattccaatggtacgtgaccagatggctctaattctt
gatgtgcagaccgatgaatggtgggagaatgtgacaactcccatgctggaatctcttaga
cggcgcctccgaaacctggttaaactcgtagaaaaacaccacaaaaagccgatttacact
gacttcaaagacgaaattggcagcgaaaccgacgtggaattaccgggctttgccgaagcc
ggagattttgaaaagtttcgcgcaaagacccgtgccttcctcctggaacatcaggacaat
aatgtaatccacaagctccggatgaatatcccactggctgcacccgatcttgacgaactg
gaacggatactctctgaaagcgggctgggagggccggaagaaattgtccgtgccagagag
gtgtcaaacggcctcggcctcttcgtgcgttcactcatagggcttgatagggaagctgca
aaacagtcgctggccacattccttacaggtaagaccctgactgcaaaccagatagagttc
ataaacctgataattaatcatcttaccgaacacggagcaatggacgctgcattactttac
gagtcgccatttaccgaccttacgccacagggcccagatgggcttttcacctcaactcaa
attgatgaattgatagctacattggaacagatcacggcaacagcattagtgcccccatgc
tcgcaacaaattacggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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