KEGG   Mannheimia varigena USDA-ARS-USMARC-1312: X874_5120
Entry
X874_5120         CDS       T03028                                 
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
mvg  Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:mvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mvg03110]
    X874_5120
Chaperones and folding catalysts [BR:mvg03110]
 Heat shock proteins
  HSP100
   X874_5120
SSDB
Motif
Pfam: AAA_2 AAA zf-C4_ClpX ClpB_D2-small AAA_5 RuvB_N Mg_chelatase AAA_22 AAA_18 AAA_7 AAA_16 AAA_14 MCM Sigma54_activat AAA_28 AAA_24 AAA_33 ResIII IstB_IS21 DUF4428 T2SSE Sigma54_activ_2 nSTAND3 DEAD TsaE AAA_3 NACHT TIP49 ABC_tran RNA_helicase AAA_PrkA AAA_17 AAA_29 AAA_23
Other DBs
NCBI-ProteinID: AHG77148
Position
complement(547085..548332)
AA seq 415 aa
MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHGEEEPLIDENQDDDASF
FTNVPTPHELHEHLDDYVIGQEHAKKVLSVAVYNHYKRLRSALSNHEATNGVELGKSNIL
LIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLMKCDFEAEQA
ERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKLLEGTVANINPQGGRKHPKGETI
PVDTSKILFICGGAFAGLDKIVESRTNTQGGIGFGAALKKDKDRQDLTELFKQVEPEDLV
KFGLIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELHFTKEALI
AIAGKAIARKTGARGLRSIVENLLLDTMYDLPTLNAKKVTIGKGCVENGDKPKVE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcatttgaaaaagaaccacactgcagtttttgcggcaaaaaacgcactgaggtcgat
caattagtagaaggcactgaaggctatatttgtaacgaatgtatcgaggaatcgtacgcc
ctattgcacggcgaagaagaacctttaattgatgaaaatcaagatgatgatgcaagcttt
tttaccaatgtgccaacaccacacgaattacacgagcatttagatgattatgttatcggg
caagaacatgctaaaaaagtgctttctgtagcagtttacaatcactataaacgtttaaga
agtgcattatcaaatcatgaagcaaccaatggtgttgagctaggtaaaagtaatatcctg
ttaattggtcctactggtagcggtaaaactttactggccgaaaccctggctcgccgttta
aacgtgccgtttgcagtggcggacgcgactactcttacccaagcaggttatgtgggtgaa
gacgtggaaaacgtgattcaaaagttactgatgaaatgcgattttgaagcggaacaagct
gagcgtggtattgtctttattgatgaaatcgacaaaatcacccgcaaatcggaaagtgct
tctattactcgtgatgtttcaggcgaaggagtgcaacaagccctgttaaaactgcttgaa
ggcacagtggcaaacatcaatccacaaggcggacgtaaacacccgaaaggtgaaaccatt
ccggtagatacctccaaaatcctgtttatttgtggtggtgctttcgcaggcttagataaa
attgtggaatctcgcactaacacccaaggcggaataggctttggtgcagcattgaagaaa
gataaagatcgccaagatttaactgaattattcaaacaagttgaacctgaagatttggta
aaattcggcttaattcctgagttaatcggtcgtttacctgtagttacgccactacaagag
ttagacgaagaagccttgattcagatcttaaccgagcctaaaaatgcaattatcaagcaa
taccaagccttattccaaatggaaggcgtagaattacacttcaccaaagaagccttaatt
gctattgcaggtaaagccatcgcccgcaaaactggagctcgtggtttacgctcaatcgta
gagaacttgttgcttgatacaatgtacgacctaccaacacttaatgcgaaaaaagtaact
atcggtaaaggttgtgtagaaaatggcgacaaaccgaaggtggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (34)   
   Pfam (34)   
All databases (40)   

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