KEGG   Mannheimia varigena USDA-ARS-USMARC-1312: X874_7890
Entry
X874_7890         CDS       T03028                                 
Name
(GenBank) endonuclease 4
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
mvg  Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    X874_7890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvg03400]
    X874_7890
Enzymes [BR:mvg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     X874_7890
DNA repair and recombination proteins [BR:mvg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     X874_7890
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AHG77425
Position
831436..832281
AA seq 281 aa
MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWQAPPLKADTIEKFKRFCAAHH
FSAEQILPHDSYLINLGNPEAEALEKSRTAFIDEMSRANQLGLKLLNFHPGSHLKKISEQ
DCLSRIAESINMAVEAVPNVIAVIENTAGQGSNLGWHFDHLAKIIEQVEDKNRVGVCLDT
CHLFSAGYDISSYEKSEAVFNDFNQTVGFHYLKGMHLNGSKTPLGSRVDRHHTLREGTIG
TEVFTFIMRNSNFDHIPLILETILPEIWADEIKFLRTLELK
NT seq 846 nt   +upstreamnt  +downstreamnt
atgaaatatattggggctcacgtgagtgcttcaggtggtgtggaaaatgcggttctgcgt
tcggtagaaattggagcgaatgcttttgcgttgtttactaaaaatcaacgtcagtggcaa
gctccgccactaaaagccgatacgattgaaaaatttaagagattttgtgcagcacatcat
ttttcagcagagcaaattttgccacacgatagttatttaattaatttaggtaatccggaa
gcagaagcattggaaaaatctcgtacggcatttattgatgaaatgagtagggcgaatcag
cttggcttgaaattactcaattttcaccctggctcgcatttaaagaaaatttctgagcaa
gattgtttgtctcgaattgcagaatctatcaatatggcagttgaagcggtgccaaatgtg
attgcagttattgaaaatacggcaggacaaggctctaatttaggttggcattttgaccat
ttagcaaaaattattgagcaagtagaagataaaaatcgagttggtgtatgtttggatact
tgtcatttattctcggctggttacgatattagctcctatgaaaaaagcgaggcagtattt
aatgactttaatcaaacggttggttttcattatttaaaagggatgcacttaaatggttca
aaaacaccactaggtagccgtgtagatagacaccatacgctaagagaaggcacaattggt
acagaagtttttacatttattatgcgaaattcaaattttgaccatattccgcttatttta
gaaacaatattacctgaaatttgggctgatgaaataaaattccttcgcacattggaacta
aaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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