KEGG   Mannheimia varigena USDA-ARS-USMARC-1296: X808_5000
Entry
X808_5000         CDS       T03027                                 
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
mvi  Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:mvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mvi03110]
    X808_5000
Chaperones and folding catalysts [BR:mvi03110]
 Heat shock proteins
  HSP100
   X808_5000
SSDB
Motif
Pfam: AAA_2 AAA zf-C4_ClpX ClpB_D2-small AAA_5 RuvB_N Mg_chelatase AAA_22 AAA_18 AAA_7 AAA_16 AAA_14 MCM Sigma54_activat AAA_28 AAA_24 AAA_33 ResIII IstB_IS21 DUF4428 T2SSE Sigma54_activ_2 nSTAND3 DEAD TsaE AAA_3 NACHT TIP49 ABC_tran AAA_PrkA RNA_helicase AAA_29 AAA_17 AAA_23
Other DBs
NCBI-ProteinID: AHG75023
UniProt: W0QCS2
Position
complement(542934..544181)
AA seq 415 aa
MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHGEEEPLIDENQDDDASF
FTNVPTPHELHEHLDDYVIGQEHAKKVLSVAVYNHYKRLRSALSNHEATNGVELGKSNIL
LIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLMKCDFEAEQA
ERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKLLEGTVANINPQGGRKHPKGETI
PVDTSKILFICGGAFAGLDKIVESRTNTQGGIGFGAVLKKDKDRQDLTELFKQVEPEDLV
KFGLIPELIGRLPVVTPLQELDEDALIQILTEPKNAIIKQYQALFQMEGVELHFTKEALI
AIAGKAIARKTGARGLRSIVENLLLDTMYDLPTLNAKKVTIGKGCVENGDKPKVE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcatttgaaaaagaaccacactgtagtttttgcggtaaaaaacgcactgaggtcgat
caattagtagaaggcactgaaggctatatttgtaacgaatgtatcgaggaatcgtacgcc
ctattgcacggcgaagaagaacctttaattgatgaaaatcaagatgatgatgcaagcttt
tttaccaatgtgccaacaccacacgaattacacgagcatttagatgattatgttatcggg
caagaacatgctaaaaaagtgctttctgtagcagtttacaatcactataaacgtttaaga
agtgcattatcaaatcatgaagcaaccaatggtgttgagctaggtaaaagtaatatcctg
ttaattggtcctactggtagcggtaaaactttactggccgaaaccctggctcgccgttta
aacgtgccgtttgcagtggctgatgcgactactcttacccaagcaggttatgtgggcgaa
gacgtggaaaacgtgatccaaaaactcttgatgaaatgcgattttgaagcggaacaagcc
gaacgaggtattgtatttattgatgagatcgacaaaattactcgcaaatcggaaagtgct
tcgattactcgtgatgtttcaggcgaaggtgtacaacaagccttgttaaaactgcttgaa
ggcacggtggctaatatcaatccgcaaggtggtcgtaagcacccgaaaggcgaaactatt
ccggtagatacctccaaaatcctgtttatttgtggtggtgcttttgcaggtttagataaa
attgtggaatctcgtactaacacccaaggcggaattggcttcggggcagtcttgaagaaa
gataaagatcgtcaagatctcaccgagctcttcaagcaagtagagccggaagatctggtg
aaattcggtctaattcctgaattaatcggtcgtttgccggtggttactccattgcaagag
cttgatgaagatgccttaattcagatcttaaccgaaccgaaaaatgcgattatcaagcaa
taccaagccctattccaaatggaaggcgtggaattgcacttcaccaaagaagccttaatt
gctattgcaggtaaagccatcgcccgcaaaactggagctcgtggtttacgctcaatcgta
gagaacttgttgcttgatacaatgtacgacctaccaacacttaatgcgaaaaaagtaact
atcggtaaaggttgtgtagaaaatggcgacaaaccgaaggtggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (34)   
   Pfam (34)   
All databases (41)   

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