KEGG   Mannheimia varigena USDA-ARS-USMARC-1296: X808_7160
Entry
X808_7160         CDS       T03027                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
mvi  Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi03030  DNA replication
mvi03430  Mismatch repair
mvi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    X808_7160
   03430 Mismatch repair
    X808_7160
   03440 Homologous recombination
    X808_7160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvi03032]
    X808_7160
   03400 DNA repair and recombination proteins [BR:mvi03400]
    X808_7160
Enzymes [BR:mvi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     X808_7160
DNA replication proteins [BR:mvi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     X808_7160
DNA repair and recombination proteins [BR:mvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     X808_7160
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_tau_5 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_5 ResIII AAA_16 AAA_14 AAA_2 AAA_18 PIF1 AAA_30 AAA_assoc_2 AAA_19 DNA_pol3_delta TsaE DNA_pol3_tau_4
Other DBs
NCBI-ProteinID: AHG75239
UniProt: W0Q8Q1
Position
complement(759943..761979)
AA seq 678 aa
MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFSGTRGVGKTSIARLFAK
GLNCEHGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQ
SQIAKHLEFILNAESIPYETIAIEKLAKAAHGSIRDSLSLTDQAIAMSNANITLDVVSQM
LGLIDDNQPLELVQAIAQADGEKAMVIIEQIASKGVDWQQLLSDIAETLHKIAMLQLVKT
SAIEETLIHFLAKQMPPEDVQFFYQLILNSKKELPFAPEQRAGVEMAILRALAFHPKQAE
RIATVVMPSVSAAPQPNNTVANTQPKPQNQISQLRENFEKNQQKSVIVSQQAPVTESVMQ
KEENTAIPSPAMAALEARKKLQQQQANLAQTEKKKPELTPPQFIAKKSENSTASLQERFI
QFAENQQQTPRQSALKAENKQKSVDDEDYRWTWLNPELENQADSAKPSDIKQAILQERTP
ELVAKTINLSCQQDRWCEIANSLNLGGFSRQIALNSYLDKYADNHLSLVLKPNMAHLDNV
ESRKNLEVALAEKGYSYDLSIGDNADKQTPLEIRRVIFKQLTEAAKSALLNDEKLMLLRN
AFDAQIDESTIRAVAQSE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgagttatcaagttttagcccgtaaatggagaccacaacgcttttcggaagtcgttgga
caacaacacgttttatctgctcttgaaaacagtttaagagaagataggcttcatcacgcc
tatctgttttcaggcactcgtggtgtgggtaaaacctccattgctcgcctttttgctaaa
gggctaaactgtgaacatggcattactgccgaaccttgtggtgaatgtgctaactgtaaa
gccattgaagagggacattttatcgatctcattgagatcgacgcagcctctcgcaccaaa
gtagaagatactcgtgaactactggataacgtacaatacaaacccaccgttgggcgtttt
aaagtttatctgattgacgaagtgcatatgctctctcgccacagtttcaatgcgttactc
aaaacccttgaggaaccgcctgaatatgttaaattcttattagcaactaccgatccgcaa
aaactgccgatcacgattctttctcgctgtatgcaattccatttgcgtgcattagaacaa
tcacaaattgcgaaacatttagagtttattcttaacgcagaaagcattccctacgaaacc
attgctatcgaaaaactagcgaaagcagcacatggtagtattcgtgattcacttagctta
actgatcaagctatcgcaatgagtaatgccaatattactctcgatgtagtaagccaaatg
ttagggcttattgatgacaatcaaccactcgagttagtacaagcaatcgcacaagctgat
ggcgaaaaagcgatggtaattattgaacaaatagcctccaaaggtgtagattggcagcaa
ttactgagtgatattgccgaaacattgcacaaaattgcaatgttacaattagtcaaaacg
agcgccatagaagaaacgcttattcattttctggcaaaacagatgccacctgaagatgtg
cagtttttctatcaacttatcctgaacagcaaaaaagagctgccttttgcccctgaacaa
cgtgctggcgtggagatggcaattctgcgagctttagctttccacccgaaacaggcagaa
aggatagcaactgtcgtaatgccaagcgtatctgctgctccacaacctaacaatactgtt
gccaatactcaaccaaagccacaaaatcagatttctcaactaagagaaaattttgaaaaa
aatcaacaaaagtctgtaattgtttcacagcaagcacctgtaacagaatctgtaatgcag
aaagaagaaaatacagctattccttctcctgcaatggctgcactagaggctcgtaaaaaa
ttacagcaacagcaagcgaatttagctcaaactgaaaaaaaaaagcctgagttgacccct
cctcaatttattgcaaaaaaatcggaaaattcgaccgcttcattgcaagagcggtttatt
caatttgctgaaaatcaacaacaaacaccgcgacaatctgctctaaaagcagaaaacaag
cagaaaagtgtagatgatgaagattaccgttggacgtggctcaatcctgaattagaaaac
caagctgacagcgccaaaccatcagatatcaaacaagctattttgcaagaacgtacacct
gaactagtggcaaaaaccattaatttatcttgccaacaagatagatggtgtgagattgct
aactcacttaatttaggtggtttttcacgccaaattgccttaaatagctatttagataaa
tacgcagataaccatctttcattagtattaaagcccaatatggcacatttagataatgtg
gaatctcgtaaaaatttagaagtagcattggctgaaaaaggctatagttatgatttatcc
atcggtgataatgcagataaacaaacgccgttagaaattcgtcgggtaattttcaagcaa
ctcactgaagcagccaaatctgctttgctgaacgatgaaaaattaatgttacttcgcaac
gctttcgatgcacaaattgatgaatcaaccattcgagccgttgcacagagtgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (32)   

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