KEGG T04356: MYVA

Mycolicibacterium vaccae: MYVA_1382

Entry

MYVA_1382         CDS       T04356

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

mvq Mycolicibacterium vaccae

Brite

KEGG Orthology (KO) [BR:mvq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mvq03009]
    MYVA_1382
   03016 Transfer RNA biogenesis [BR:mvq03016]
    MYVA_1382
Enzymes [BR:mvq01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     MYVA_1382
    5.4.99.29  23S rRNA pseudouridine746 synthase
     MYVA_1382
Ribosome biogenesis [BR:mvq03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MYVA_1382
Transfer RNA biogenesis [BR:mvq03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    MYVA_1382

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

ANI38596

Position

1417189..1418025

AA seq 278 aa
MRDGLGPARVRLRGGAVLVEFADRFGEAAAQKVLDGEVFTADGEVVGAATVLQPNSVVYL
YRDLPDEVPVPFDMPIVYRDENVVVVDKPHFLATMPRGSHVAETALVRLRRELDVPELSP
AHRLDRLTAGVLVFTTRRAVRGAYQTLFARGEVAKTYLARSSAPHTGHEFPVTVRSRIVK
RRGSLQACEEPGEPNAETVVEHMGDGRYRLTPRTGRTHQLRVHMNSLGLPIDGDPLYPDV
VEVAAGDFSAPLRLLAQTLEFTDPITGLHRRFTSARSL

NT seq 837 nt +upstreamnt +downstreamnt
gtgcgtgacggactcggtcccgcgcgggtgcggctgcgtggaggcgcggtgctggtggag
ttcgccgaccggttcggcgaagccgccgcgcagaaggtgctcgacggcgaggtgttcacc
gccgacggtgaggtggtgggtgcggccactgtgctgcaaccgaattcggtggtgtatctg
taccgtgacctgcccgacgaggtaccggtgccgttcgacatgccgatcgtgtaccgggac
gagaacgtcgtcgtcgtggacaagccgcacttcctggcgacgatgccgcgcggcagccac
gtcgccgagaccgccctggtgcgtctgcgccgtgagctcgatgtgcccgaactcagcccc
gcgcaccggctggaccggttgaccgcgggggtgctggtgttcaccacccggcgcgcggtc
cgcggcgcgtatcagacgttgttcgcgcgcggggaggtggccaagacctacctcgcgcgg
tcgtcggcgccgcacaccgggcacgagttcccggtgacggtgcgaagccggatcgtcaag
cggcgaggctcgttgcaggcctgtgaggagccgggggagccgaacgcggagacggtggtg
gagcacatgggcgacggccggtatcggctcacgcccagaaccggacgcacccaccagttg
cgggtgcacatgaactcgctggggttgccgatcgacggggacccgctctaccccgacgtc
gtcgaggtggccgccggggatttctcggcgccactgcggctgctcgcccagacgttggag
ttcacggatccgatcaccggcctgcaccggcggttcaccagtgcgcggtcgctgtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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