KEGG   Mycolicibacterium vaccae: MYVA_2757
Entry
MYVA_2757         CDS       T04356                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mvq  Mycolicibacterium vaccae
Pathway
mvq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mvq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYVA_2757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvq03400]
    MYVA_2757
DNA repair and recombination proteins [BR:mvq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYVA_2757
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MYVA_2757
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_5 AAA_19 DUF87 Helicase_RecD UB2H AAA_7 HEM4 AIG1
Other DBs
NCBI-ProteinID: ANI39922
Position
2861809..2863917
AA seq 702 aa
MDDVVRSGRRFEVVSEYEPAGDQPAAIDELERRIRAGEKDVVLLGATGTGKSATTAWLIE
RLQRPTLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSS
INDDVERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELQVGDEVPRDALLR
LLVDVQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEELYYLHPLTGDIV
RKVDSLRIFPATHYVAGPERMAQAITSIERELEERLAELEGQGKLLEAQRLRMRTNYDIE
MMRQVGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGGMYEGDM
SRKRNLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGAYELSQAGGEFVEQVIRP
TGLVDPQVVVKPTKGQIDDLIGEIRKRTERDERVLVTTLTKKMAEDLTDYLLEMGIRVRY
LHSEVDTLRRVELLRQLRLGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSPRSL
IQTIGRAARNVSGEVHMYADKMTDSMKQAIDETERRRAKQIAYNKEHGIDPQPLRKKIAD
ILDQVYREADDTEAVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSNMPRAELADLI
KDLTAQMMTAARDLQFELAARIRDEIADLKKELRGMDAAGLK
NT seq 2109 nt   +upstreamnt  +downstreamnt
gtggacgacgtcgtccgttcgggccggcgtttcgaggtggtcagcgaatacgagcccgcc
ggcgatcagcccgccgcgatcgacgaactggaacgccgcatccgcgcgggggagaaggac
gtggtgctgctcggtgcgaccggcaccggcaagtcggccaccacggcctggctcatcgag
cggctgcagcgccccaccctggtgatggcgccgaacaagacattggccgcgcagctggcc
aatgagctgcgggagatgttgcccaacaacgccgtcgagtacttcgtctcctattacgac
tactaccaacccgaggcgtacatcgcccagaccgacacctacatcgagaaggacagctcg
atcaacgacgatgtggagcggcttcgccactcggcgacgtcgaacctgctgtcgcgccgg
gatgtggtggtggtcgcgtcggtctcctgcatctacggcctcggcaccccgcagtcatac
ctggaccgctccgtcgagctccaggtcggcgacgaggtgccccgcgatgcgctgctgcga
ctgctcgtcgacgtccagtacacccgcaacgacatgtcgttcacccgcggctcgttccgg
gtccgcggcgacaccgtcgagatcatcccgtcctatgaagagctggcggtgcgcatcgag
ttcttcggtgacgagatcgaggagttgtactacctgcacccgctgaccggcgacatcgtg
cgcaaggtcgactcgctgcggatcttcccggccacccactacgtcgccgggcccgaacgg
atggcgcaggcgatcaccagcatcgaacgggaactggaggaacggctggccgagctggag
ggccagggcaagctgctggaagctcagcggctgcggatgcgcaccaactacgacatcgag
atgatgcgccaggtcgggttctgttcgggcatcgagaactactcgcggcacatcgacggc
cgtggccccggcaccgcgccggcgacgttgatcgactatttcccggaggacttcctgctc
gtcatcgacgagtcgcacgtcaccgtgccgcagatcggcggcatgtacgagggtgacatg
tcccgtaagcgcaatctcgtcgacttcggtttccggttgccctcggcggtggacaaccgg
ccgttgacctgggaggagttcgccgaccggatcggccagacggtgtacctgtcggcgacg
ccgggcgcttacgagctgagccaggccggcggcgagttcgtcgagcaggtcatccgcccg
accggtctcgtcgacccgcaggtggtggtcaaaccgaccaagggccagatcgacgacctg
atcggcgagatccgcaagcgcaccgaacgcgacgagcgcgtgctggtcaccacgctgacc
aagaagatggccgaggacctgaccgactatctgctggagatggggatccgggtccgctat
ctgcactccgaagtcgacaccctgcgccgggtcgagctgctccgtcagctgcggctgggg
gagtatgacgtcctgatcggcatcaacctgttgcgtgagggtctggaccttcccgaggtg
tcgctggtggcgatcctcgacgccgacaaggaagggttcctgcgttcgccgcgcagcctg
atccagaccatcggccgcgctgcgcgaaacgtgtccggcgaggtgcacatgtacgccgac
aagatgacggactcgatgaagcaggccatcgacgagaccgagcgtcgccgcgcgaagcag
atcgcctacaacaaagagcacggcatcgacccgcaaccgttgcgcaagaagatcgccgac
attctcgaccaggtgtaccgggaggccgacgacaccgaagcggtcgaggtcggaggctcc
ggccgcaacgcatcacgcggtcggcgggcgcagggggagccgggccgtgcggtcagtgcg
ggcgtgttcgagggcagagacacctccaacatgccgcgcgccgaattggccgacctgatc
aaggatctgaccgcgcagatgatgacggcggcgcgcgacctgcagttcgaactggcggca
cggatccgcgacgagatcgccgacctgaagaaggaactgcgcggcatggacgccgccggc
ctgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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