KEGG   Mannheimia sp. USDA-ARS-USMARC-1261: X781_19010
Entry
X781_19010        CDS       T03026                                 
Name
(GenBank) CRISPR-associated protein, Csn1
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
mvr  Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:mvr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mvr02048]
    X781_19010
Prokaryotic defense system [BR:mvr02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    X781_19010
SSDB
Motif
Pfam: HNH_4 RuvC_III Cas9_a Cas9_REC
Other DBs
NCBI-ProteinID: AHG74047
UniProt: W0Q6X6
Position
1928186..1931329
AA seq 1047 aa
MKLLRYILGLDLGIASVGWAIVEIDENDFPIRLIDIGVRTFDKAEVSKTGESLALARRLA
RSTRRLIRRRAFRLLKGKRLLKQHNVINKEALTTLPTDCWALRVKGLDERLSPTEWSAVL
LHLLKHRGYLSQRKNEAKSADKEMGALLSGVASNHQLLVENQFRTPAEIAVKKFALEEGH
IRNQLGAYTHTFNRLDLLAEMKLLFQTQRELGNPHTSGQLEQEFCELLMWQKPALSGDAI
LKMLGKCTFETNEYKAAKHSYTAERFVWLTKLNNLRILEHGSERVLNTDERSLLLNQPYE
KAKLTYTQVRKLLGLSEEARFNGVRYGKEKAEDATLIELKAYHAIRKAVEKADKSAWETL
KNQTALLDEIGTTFSIYKTDDDITEQLNGKLSDTVLNALLENLNFDKFIQLSLKSLYNIV
PLMEQGLRYDEACQQIYGDHFGKKSGEINRLLPPIPADEIRNPVVLRSLTQARKVINAVI
RLYGSPARIHIETARELGKSYKDRKEIEKRQEQNRAEREKATAQFKTLFPTFIGEPKGKD
ILMMRLYEQQNGQCLYSGKPLNLNRLLEKGYVEIDHSLPFSRTWDDSQNNKVLVLAGENQ
NKGNQTPFEWLGKDEHQWALFVARVNGCRFPYAKKQRILTQKLDEQGFIERNLNDTRYIA
RFLVNFVRENLHLTGKGKNRVFASNGQITAFLRGRWGLSKVREESDRHHALDAVVVACST
VAMQQKITRFVKYQEGNLQTAERIDRETGEIIPLHFPDPWHFFRQEVMIRIFSENPQEDL
IIQLPDRPEANHEFVQPLFVSRMPTRKMSGQGHMETIKSAKRLDEGISVSKVPLTQLKLK
DLDNMVNREREKALYEALKARLNAFNDDPTKAFAEPFYKKGGQQVKAVRVEQVQKSGVVV
RNGNGVADNASMVRVDVFIKGGKYFLVPIYTWQVAKGILPDRAVVAAKDESEWELMDKTA
QFLFSMFPNDLIQVKTKKETFFGYYNGLDRATGAINLKEPDSNINKGKSGLHRSIGVKTA
LSVEKYQVDELGKNIRPCRPSKRQAVR
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgaaactgcttcgctatattcttggtttagacttaggtattgcttccgttggttgggca
atagtagaaattgatgagaatgattttccgattcggttaattgatatcggcgtacgaacc
tttgataaagcagaagtctccaaaacaggtgaatcgcttgccctcgcccgccgtcttgcc
cgttccacccgccgcttaatccgccgccgcgcatttcgcctattaaaaggaaaacgtctc
ttaaaacaacataatgtaatcaataaagaagcactgactaccctgcctaccgattgctgg
gcattacgggtaaaaggtttagacgaacgcctctcgccaacagagtggtcggcggtattg
cttcatttattgaaacatcgtggctatctttctcaacgtaaaaatgaagcgaaaagtgca
gataaagaaatgggggcattgctttccggtgtggcaagcaaccaccaattattagtcgaa
aaccaattccgtacaccggcagagattgcagtgaaaaaatttgctctcgaagagggacat
atccgcaatcagctaggggcttacacgcacacctttaatcgcctcgatttactcgccgaa
atgaaattactgtttcaaactcagcgagaactcggcaacccacatacaagcggtcaatta
gagcaggaattttgcgaattgctgatgtggcagaaaccggcgttatcgggcgatgcgatt
ttgaaaatgctcggtaaatgcacctttgaaaccaacgaatataaagccgccaaacacagc
tacacggcggaacgttttgtttggctgacgaaactgaataatttacggattttagaacac
ggctcagagcgtgttttaaataccgatgaacggagcttattgctcaatcagccttatgaa
aaagccaaactaacctacacccaagtgcgtaaattattgggtttatcggaagaggctcgt
ttcaatggtgtacgttacggcaaagagaaagccgaagatgccacactgatcgagctgaaa
gcctaccacgctattcgtaaagcggtggaaaaggcggataaatcagcgtgggaaaccttg
aaaaatcagaccgcacttttagacgaaatcggcacgacattctcgatttataaaaccgat
gacgacatcactgaacaactcaacggcaagctgagtgatacggtactgaacgccctgctg
gaaaacctcaacttcgataaattcattcaactttccttaaaaagcctctacaacattgtg
ccactaatggagcaaggattgcgttatgacgaggcgtgccaacagatttacggcgaccat
tttggtaaaaaatcgggtgaaatcaaccgcttgttacccccaatccctgccgatgaaatt
cgtaatccggtagtattgcgttcgcttacccaagccagaaaagtgatcaatgctgtgatc
cgcctctacggctcgccagctcggattcatattgaaaccgcccgagaattgggtaaatcc
tacaaagatcgcaaagagattgaaaaacgccaagagcaaaatcgtgccgagcgggaaaaa
gcaacggcacaattcaaaacgcttttccctacctttattggcgagccgaaaggcaaagat
attttgatgatgcggctgtatgaacagcaaaacgggcagtgcctatatagcggaaaaccg
ctcaatttaaaccgcttgttggaaaaaggctatgtggaaatcgaccactccctaccgttt
tcccgcacgtgggacgacagtcaaaataacaaagttctggtgcttgccggcgaaaatcag
aataaaggcaatcaaacgccgtttgagtggctcggcaaagacgaacatcaatgggcgtta
tttgtcgctcgggtgaatggctgtcgctttccgtatgcgaaaaagcaacggattttgacc
caaaaactcgatgaacagggctttattgaacgtaacctaaacgacacccgctatatcgcc
cgtttcttggtgaattttgtgcgtgagaatttacatttaaccggcaaaggcaaaaatcgg
gtgtttgcctcaaacggtcaaatcaccgctttcttgcgtgggcgttggggattaagcaag
gtgcgtgaagagagcgaccgccaccacgccctagatgcggtggttgttgcctgttcaacg
gtagcgatgcagcaaaaaatcacccgctttgtgaaatatcaagaagggaatttacagacg
gcagaacgcattgaccgagaaaccggcgagatcattccgctgcatttccctgatccgtgg
cacttcttccgccaagaggttatgatccgcattttcagtgaaaatccacaggaagatctg
attatccaactgccggatcgccctgaggcaaaccacgaatttgtgcaaccgctgtttgtt
tctcgtatgccaacgagaaaaatgagcggacaggggcatatggagacgattaaatccgcc
aaacggttagacgagggcattagcgtttccaaagtgccactcacccagctcaaattgaaa
gatctggacaatatggtcaatcgtgagcgggaaaaagccctttatgaagcattaaaagca
cgtttaaatgcgtttaatgacgacccaaccaaagcctttgccgaaccattctataaaaaa
ggcgggcaacaagtgaaagccgtgcgggttgagcaggtgcaaaaatcgggcgtggtggta
cgtaacggcaacggcgttgccgacaacgcctcaatggtacgggttgatgtgtttatcaaa
ggcggaaaatacttccttgtgccgatttacacttggcaagtggcgaaaggaattttgccg
gatagggcggttgttgctgcaaaagacgaatctgaatgggaattgatggataaaaccgct
caatttttattctcgatgttcccaaatgatttaatccaagtcaaaacgaagaaagaaaca
ttctttggttattacaatggattagatcgtgcaacaggtgcaattaacctcaaagaaccc
gatagtaatatcaacaaaggtaagtcgggcttacatcgtagtattggcgtaaaaaccgcc
ctttccgttgaaaaataccaagtcgatgaactcggtaaaaatatccgcccttgtcgccca
agcaaacgacaagccgttcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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