KEGG   Mannheimia sp. USDA-ARS-USMARC-1261: X781_5960
Entry
X781_5960         CDS       T03026                                 
Name
(GenBank) Primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
mvr  Mannheimia sp. USDA-ARS-USMARC-1261
Pathway
mvr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mvr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    X781_5960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvr03400]
    X781_5960
Enzymes [BR:mvr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     X781_5960
DNA repair and recombination proteins [BR:mvr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     X781_5960
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR TrwB_AAD_bind AAA_22 AAA_19 Zot AAA_30
Other DBs
NCBI-ProteinID: AHG72745
UniProt: W0Q4G8
Position
606636..608834
AA seq 732 aa
MALNVPLHRFFDYLLPDELNAGKGSRVVVPFGRQTKIGIVVDFPQTSDVPIDKLKPIKNV
LDLDTLFDDEMWQLLTWAARYYHAPIGEVLNSALPVKLRNGDSTERSQPDYFVVTEQGRK
SLIIGENKKAKKQVELLTELAEFAKFFEKPTACSPSAWKGLLEKGYVEKIDVPFISQSWQ
QSLGELPLVNVQNRLTLNKQQTLVVSRLNVQNEFAAFLLNGVTGSGKTEVYLQFIETVLK
RNRQVLVLVPEIGLTPQTVQRFKARFNVEIDVLHSNMNETERLNAWLRAKNGESAIVIGT
RSALFTQFKKLGAIILDEEHDSSFKQQEGWRYHARDLAVVRAKNADIPIVLGSATPSLES
LQNVQNGKFIELGLTARAGNAQIANQHIIDLKTQRITAGLSERLFSMMKHHLEQGNQVML
FLNRRGFAPVLLCHECGWICECEACNKPFTYHQKQCVLRCHHCATQRVIPRQCGHCGSTN
LITTGVGTEQLEQVLKEQFPTYQVTRIDRDSTSRKGSLENHLNDIREGKSQILIGTQMLA
KGHHFPNVTLVAIVNVDSALFSTDFRAEEKLAQLYLQVAGRAGRAEKKGEVVLQTHYPDH
PLLKTLLEQGYSEFAKEALKIRKIMALPPFSSQVLFKATGKNNEQTLKVLEQLADYFKQK
IRQQHWQGFQLIPPFSAPMAKKAGFYRWLLLIQHPTRNALQQLLNWFDQEKESLDIPTNI
RLSLDIDPQEIG
NT seq 2199 nt   +upstreamnt  +downstreamnt
gtggcactgaatgtgccgttacatcgtttttttgactacttactgcctgacgagctgaat
gccggtaagggcagcagggttgttgtacctttcggcaggcaaactaaaatcggcattgtg
gttgattttccgcaaacgagtgatgtgccaattgataaacttaaaccgattaaaaacgta
ttagatttagatactcttttcgatgatgaaatgtggcagctgcttacttgggctgctcgc
tattatcacgccccaataggcgaagtattaaacagtgctttgcccgtcaaacttcgtaat
ggcgattctacagaacgctcccaacccgattattttgtggtaacggaacaaggaagaaaa
tccttaattatcggcgaaaacaaaaaagccaaaaaacaggttgagcttttaactgaactt
gccgaatttgcaaaattttttgaaaaaccgaccgcttgcagcccttctgcgtggaaagga
ttattagagaaaggttatgttgagaaaattgatgtgccttttatttcgcaatcgtggcaa
caatcgcttggcgaattgccgttagtgaatgtgcaaaatcgtctcaccttgaataaacag
caaaccttagtagttagccgtttaaatgtgcaaaatgagtttgctgcttttttactgaat
ggggtaacgggttcgggcaaaaccgaagtttacctgcaatttatcgaaaccgtactaaaa
cgcaaccggcaggtgcttgtgcttgtaccggaaattgggctaacaccacaaacggtacaa
cgttttaaagctcgctttaatgtggaaattgacgttttacattccaatatgaatgaaact
gaacgtctgaatgcgtggcttcgagctaaaaatggcgaaagtgcgattgttatcggtaca
cgttccgccctctttactcaatttaagaaattgggggcgattattttagatgaagaacac
gatagttcattcaaacaacaggagggctggcgttaccacgcacgagatttggcggtggtg
agggcaaaaaatgcagatattcctattgtgctaggctcagccacgccaagccttgaaagc
ctacaaaatgttcaaaatggcaaattcattgaattagggctcactgcacgggctggtaat
gcacaaattgctaatcaacatattattgatttaaaaacacaacgcattactgcgggttta
tctgaacgattgttttcaatgatgaaacatcatttggagcaaggcaaccaagtgatgctg
tttttaaatcgtagaggctttgcccctgtgttactttgccacgaatgcggttggatttgc
gagtgtgaggcgtgcaataagccctttacttaccatcaaaaacagtgtgtgctacgctgt
catcattgtgctactcagagggtaattcctcgccagtgtggacattgtggctcaaccaat
ttgattactaccggtgttggcactgagcagctggaacaagtgcttaaggagcaatttcca
acttaccaagttactcgaattgaccgagattctacttcacggaaaggttcactagaaaat
caccttaacgatattcgagaaggcaaaagccaaattttgattggaacacaaatgttagca
aaagggcatcatttccctaatgttacgttggtagcgattgtaaatgtggattcagccctt
ttctcgactgatttccgagcggaagagaaacttgctcaactttatttgcaagtggctggc
agagcaggacgtgccgagaaaaagggcgaagtagtgctacaaacacactacccggatcac
ccattgttaaaaaccttgttagaacaaggctatagcgaatttgccaaagaagccttaaaa
atacgaaagataatggcattgccgccgttttcctcccaagtgctatttaaagcgacaggg
aagaataatgagcaaacattaaaagtgcttgaacaacttgcggattattttaagcaaaaa
atccgacaacaacattggcaaggttttcagttgattccaccattttctgctccaatggca
aaaaaagcaggtttttaccgctggttgttgttaatacaacacccaaccagaaatgctttg
caacagttactcaattggtttgatcaagaaaaagaaagtttagatattccaacaaatatt
aggctgagtttggatattgatccacaagaaattgggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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