KEGG   Myotis brandtii (Brandt's bat): 102242080
Entry
102242080         CDS       T02920                                 
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03082  ATP-dependent chromatin remodeling
myb03250  Viral life cycle - HIV-1
myb04714  Thermogenesis
myb05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102242080 (SMARCB1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102242080 (SMARCB1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    102242080 (SMARCB1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    102242080 (SMARCB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:myb01009]
    102242080 (SMARCB1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myb03021]
    102242080 (SMARCB1)
   03036 Chromosome and associated proteins [BR:myb03036]
    102242080 (SMARCB1)
Protein phosphatases and associated proteins [BR:myb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102242080 (SMARCB1)
Transcription machinery [BR:myb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102242080 (SMARCB1)
    SWI/SNF complex
     102242080 (SMARCB1)
Chromosome and associated proteins [BR:myb03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102242080 (SMARCB1)
   PBAF complex
    102242080 (SMARCB1)
   SWI/SNF complex
    102242080 (SMARCB1)
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 102242080
NCBI-ProteinID: XP_005875548
UniProt: S7NAZ5
Position
Un
AA seq 339 aa
MFRGSLYKRYPSLWRRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEK
YKAVSISTEPPTYLREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPL
CFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDL
DLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEK
ENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDA
DQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgttccgaggttctctgtacaagagatatccctcactctggaggcgactagccactgtg
gaagagaggaagaaaatagttgcatcgtcacatgatcatggatacacaaccctggccacc
agcgtgactctgttaaaagcctcagaggtagaagagattctggacggcaatgacgagaag
tacaaggccgtgtccatcagcacggagccccccacctacctcagggaacagaaagcaaag
aggaacagtcagtgggtgcccaccctgcccaacagctcccaccatctagacgctgtaccg
tgctccacgaccatcaacaggaaccgcatgggccgggacaagaagagaaccttccctctc
tgctttgatgaccatgacccagcagtgatccacgagaatgcgtcccagcctgaggtgctg
gtccccatccggctggacatggagattgatgggcagaagctaagggatgcctttacctgg
aatatgaatgagaagctgatgactcctgagatgttttcagaaatcctctgtgatgatcta
gatttgaacccactgacgttcgtgccagctatcgcctctgccatcagacagcagattgag
tcctatcccacggacagcatcctggaggaccagtcagaccagcgtgtaatcatcaagctg
aacatccatgtggggaacatctccctggtggaccagtttgagtgggacatgtcagagaag
gagaactcgcccgagaagttcgccctgaagctgtgctcggaactgggactaggcggggag
tttgtcaccaccatcgcctacagcattcgaggacagctgagttggcatcagaagacctac
gccttcagtgagaaccccctgcccacggtggagattgctatccggaacacaggggatgct
gaccagtggtgcccgctgctggagaccctgacggatgccgagatggaaaagaagatccgt
gaccaggacaggaacacaaggcgtatgaggcgtctcgccaacactgccccagcctggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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