KEGG   Myotis davidii (David's myotis): 102751904
Entry
102751904         CDS       T02992                                 
Symbol
KDM2B
Name
(RefSeq) lysine demethylase 2B
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
myd  Myotis davidii (David's myotis)
Pathway
myd03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:myd00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102751904 (KDM2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:myd03000]
    102751904 (KDM2B)
   04121 Ubiquitin system [BR:myd04121]
    102751904 (KDM2B)
   03036 Chromosome and associated proteins [BR:myd03036]
    102751904 (KDM2B)
Enzymes [BR:myd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     102751904 (KDM2B)
Transcription factors [BR:myd03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    102751904 (KDM2B)
Ubiquitin system [BR:myd04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     102751904 (KDM2B)
Chromosome and associated proteins [BR:myd03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102751904 (KDM2B)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     102751904 (KDM2B)
SSDB
Motif
Pfam: PHD_4 F-box-like JHD F-box Cupin_8 JmjC PHD zf-CXXC
Other DBs
NCBI-GeneID: 102751904
NCBI-ProteinID: XP_015422752
Position
Un
AA seq 1297 aa
MEAEKDSGRRLRPIDRQRYDENEDVSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAERDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
MEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DTPRKPSIDGFSSDSWLDMEEESCEQQPQEEEKEEEEEEEGADKVPKPPADGPASPTSIP
SEDQEPPGKKPKAPALRFLKRTLSNESEESVKSTTMPIDDPKTPTGSPTTEVPAKWTHLT
EFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPTLAITGVPVV
TWPKKTPKNRAIGRPKGKLGPASAFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKE
DTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQ
KRGPGFKYASNLPGSLLKEQKMNRDNKEGQESAKRRSECEEAPRRRSDEHPKKVPPDSIL
RRKSDDVHLRRKRKYEKPQEPSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTY
FQQQLKPGKEDKLFRKKVPTVPPLPSPSFTSRLDWGRILGRGWGGLGGCSPERGLTCPCP
RPSSAALRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGPSTESAEGHDEKKKVKMRRKR
RLPSKELSKELSKELNQEIQKTESSLANENHQPIKSEPESENEEPKRPVGLCERPHRFSK
GLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCMQMERHVIRPPPISPPPDSLPLDD
GAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCRSITPLMLS
GIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCTSSCPLLRTLD
VQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPL
LSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHID
LRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq 3894 nt   +upstreamnt  +downstreamnt
atggaggcagagaaagactctggaagaagattgcgcccgattgaccgccagagatacgac
gagaacgaagacgtgtcggacgtggaggagatcgttagtgtccgcggcttcagcctggag
gagaagctgcgcagccagctgtaccagggggacttcgtgcacgccatggagggcaaagat
ttcaactatgagtacgtgcagagagaagctctcagggttcccttgatatttcgagaaaag
gatggactgggaattaagatgcctgaccctgacttcacagtccgagatgtcaaactccta
gtgggcagccggcggctggtggacgtgatggatgtgaacactcagaagggcacagagatg
agcatgtcccagtttgtgcgatactacgagacacccgaggccgagcgggacaagctgtac
aacgtcatcagcctggagttcagccacaccaagctggagcacctggtcaagcgtccaact
gtggtagacctggtggactgggtggataacatgtggccgcagcacttgaaggagaagcaa
atggaagccacaaacgccattgcagagatgaagtacccgaaagtgaagaagtactgtctg
atgagcgtgaaaggttgtttcactgacttccacatcgactttggaggcacttccgtttgg
taccatgttttccggggtgggaagatcttttggctgattcctccaaccctgcacaacttg
gcgctgtacgaggagtgggtgctgtcaggcaaacagagtgacatcttcctgggagaccgt
gtggagcgctgccaaagaattgagctgaaacagggctacacgtttttcatcccttccggc
tggatccatgcagtctacacccctgtagactctctggtattcggtggaaacatcctgcac
agctttaacgtgcccatgcagctgcggatttatgagatcgaggacagaacacgggtgcag
cccaaattccgttaccccttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtgtgacccagaggtcctacctcactcaggaataccagagagaatcaatgctgatt
gataccccaagaaagcccagtatagacggcttctcatctgattcctggctggacatggag
gaggagtcttgtgagcagcagccccaggaggaggagaaggaggaggaggaggaagaagag
ggtgcagataaggtgcccaagccacctgccgatggccctgcctcacccaccagcatcccc
tccgaggaccaggagccccccgggaagaagcccaaagcacctgccctgcggttcctcaaa
aggactttgtctaatgagtcagaggaaagcgtcaagtccacgacgatgcccatagatgac
cctaagacgcccactggctctcccaccactgaggtccctgccaaatggacccacctcacc
gagtttgaactgaagggcctgaaagctctggtggagaaacttgaatccctgccagaaaac
aagaagtgtgtccctgagggcatcgaggacccccaggcgctcctggagggtgtgaagaat
gtcctgaaggagcacgctgatgacgaccccactctggccatcactggggtccccgtagtc
acctggccaaagaagactccaaagaaccgggccatagggaggcccaaagggaagctgggc
cccgcctccgcgttcgggggccccgggcggatgaagcagagctgcatcatgcggcagtgc
atcgcgccagtgctcccccacaccgccgtgtgcctcgtgtgtggcgaggcggggaaggaa
gacacagtggaagaggaagaaggcaagtttaacctcatgctcatggagtgctccatctgc
aacgaaatcatccaccctggatgccttaagattaaggagtcagagggcgtcgtcaacgat
gagcttccaaactgctgggagtgtccgaagtgtaaccacgccggcaagaccgggaaacaa
aagcgtggccctggcttcaagtacgcctccaacctgcccggctccctgctcaaggagcag
aagatgaaccgggacaacaaggaaggccaggagtcggccaagcggaggagcgagtgtgag
gaggcgccccggcgccggtcggacgagcaccccaagaaggtgcccccagacagcatcctg
cgccgaaagtcagacgacgtgcacctgaggaggaagcggaaatacgagaagccccaagag
ccgagtgggcgcaagcgagcctcgacacttcagacgtcccctggttcctcctctcacctc
tcgccgaggccccctctaggcagcagcctcagcccttggtggagatccagtctcacctac
ttccagcagcagctgaaacctggcaaagaagataaacttttcaggaaaaaggtacccact
gtccctcccctcccctccccttccttcacctcccgcctggactggggcaggatcctggga
agagggtggggaggcctgggtggatgcagccctgagcggggactcacctgcccttgcccc
cgtccttcctcagcggcgctccggcgcttcaagcaggaaccggaggacgacctgccggag
gcgccccccaagaccagggagagcgaccactcccgctccagctcccccacggccgggccc
agcaccgagagcgcggagggtcacgatgagaagaagaaggtgaaaatgcgccggaaacgg
cggctccccagcaaggagctgagcaaggagctgagcaaggagctcaatcaggagatccag
aagacggagagcagcctggccaatgagaaccaccagcccattaagtcggagcccgagagt
gagaacgaggagcccaagcggcccgtgggcctctgcgagcgcccccatcgcttcagcaaa
gggctcaacggcaccccccgggaactgcgacaccagctggggcccggcctgcgcagccca
ccccgcgtcatctcccggccccctccttccgtgtccccgcccaagtgcatgcagatggag
cgacatgtgatccggccgccgcccatcagccccccacccgactcgctgcccctggacgat
ggggcggcccacgtcatgcacagggaggtgtggatggccgtcttcagctacctcagccac
caagacctgtgtgtctgcatgcgggtctgcaggacctggaaccgctggtgctgtgataag
cggttatggacccgcatcgacctgaaccactgcaggtccatcacgcccctgatgctgagc
ggcatcatccggcgacagcccgtctccctggacctcagctggaccaatatctccaagaaa
cagctgagctggctcatcaaccgtttgccagggctccgagacttggtgctgtcaggctgc
tcatggatcgcggtctcggccctctgtacctccagttgtccgttgctccggaccctggat
gtccagtgggtagaagggctaaaggatgcccagatgcgggatctcctgtctccgcccaca
gataacaggccaggtcagatggacaatcggagcaagctccgaaacatcgtggagctgcgt
ctagcaggcctggacatcaccgacgcctccctgcggctcatcatccgccacatgcccctg
ctctccaagctccaccttagttactgtaaccatgttactgaccagtccatcaacctgctc
actgcagtgggcaccaccacccgggactccttaacagaaatcaacttatcagactgcaat
aaggtcactgaccaatgcctgtccttcttcaaacgctgtggaaatatctgtcatattgac
ctgaggtactgcaagcaagtcaccaaggaaggctgtgagcagttcatagctgaaatgtct
gtgagtgtccagtttgggcaagtggaagaaaaactcctgcaaaaactgagttag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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