KEGG   Myotis davidii (David's myotis): 102773633
Entry
102773633         CDS       T02992                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group box 1
  KO
K10802  high mobility group protein B1
Organism
myd  Myotis davidii (David's myotis)
Pathway
myd03410  Base excision repair
myd04140  Autophagy - animal
myd04217  Necroptosis
myd04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:myd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102773633 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102773633 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    102773633 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102773633 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:myd03036]
    102773633 (HMGB1)
   03400 DNA repair and recombination proteins [BR:myd03400]
    102773633 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:myd04147]
    102773633 (HMGB1)
Chromosome and associated proteins [BR:myd03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    102773633 (HMGB1)
DNA repair and recombination proteins [BR:myd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102773633 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     102773633 (HMGB1)
Exosome [BR:myd04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102773633 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box NOA36 Nop14 CENP-B_dimeris HMG_box_5 RXT2_N Nucleo_P87
Other DBs
NCBI-GeneID: 102773633
NCBI-ProteinID: XP_006763791
UniProt: L5LV01
Position
Un
AA seq 245 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEDDDEEEEEEEDEEEDDEEEDDDYYKIIVVPLTEYHSVIAKKSCSCFVDI
LNASQ
NT seq 738 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgccttctttgtg
caaacttgccgggaggaacacaagaagaagcacccagatgcttccgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaggagaaaggaaaattt
gaagacatggcaaaggcggacaaggctcgttatgagagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaaattcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggggagcatcctggtcta
tccattggtgacgttgcaaagaagctgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgctaagctgaaggagaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgctgccaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaagaagatgaggacgatgatgaggaggaagaggaggag
gaagatgaagaagaagatgatgaagaagaagatgatgactattacaaaataattgttgtt
ccattaactgaatatcactctgtaattgcaaaaaaaagttgcagctgttttgttgacatc
ctgaatgcttctcagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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