KEGG   Mycobacterium sp. EPa45: AB431_29220
Entry
AB431_29220       CDS       T03960                                 
Name
(GenBank) poly(A) polymerase PcnA
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
mye  Mycobacterium sp. EPa45
Pathway
mye03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mye00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AB431_29220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mye03019]
    AB431_29220
Enzymes [BR:mye01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     AB431_29220
Messenger RNA biogenesis [BR:mye03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     AB431_29220
SSDB
Motif
Pfam: PolyA_pol HD PolyA_pol_RNAbd tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AKK30084
UniProt: A0A0G3ITG1
Position
complement(6158734..6160197)
AA seq 487 aa
MSEATHDVELLARALVALNRQGAVLREIGGLFAAAGHELYLVGGSVRDAVLGRLNPDLDF
TTDARPEVIQKIVRPWADALWDTGIEFGTVGVGKGLGTDMDRLEITTFRADSYDQVSRNP
QVRYGDRLEDDLVRRDFTVNAMAVRITADGPGDFIDPLGGLTALRQRILDTPAAPEVSFG
DDPLRMLRAARFASQLQFDVSDRVRRAIVEMAPQLGRITVERVAVELDKMLLGVDPVAGI
DLMVQTGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAMALEEPGERDLVLRWAA
LLHDIGKPATRRHESDGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDDVSQLVYLHLRFH
GYGDGKWTDSAVRRYVADAGPLLPRLHKLVRADCTTRNKRRAARLQANYDELETRIAELA
AKEDLQRVRPDLDGNEIMRLLDIPPGPQVGQAWNFLKELRLDRGPLDHDEAVAELLAWWN
AKDQPGV
NT seq 1464 nt   +upstreamnt  +downstreamnt
gtgtccgaagccacccatgacgtcgagctgctcgcccgggccctcgtcgccctcaaccgg
cagggggccgtgctgcgggagatcggtggtctgttcgctgcagcggggcacgagctctat
ctcgtcgggggcagtgtgcgcgacgccgttctgggccggttgaaccccgacctcgacttc
accaccgacgcccggcccgaggtcatccagaagatcgtgcgtccgtgggcagacgcgctg
tgggataccggtatcgagttcggcaccgtcggagtgggcaagggcctgggtacggacatg
gatcggctggagatcaccaccttccgcgccgacagctacgaccaggtgtcgcgcaatccg
caggtccgctatggcgaccggctggaggacgacctggtccggcgcgacttcaccgtcaac
gcgatggcggtgcgcatcaccgcggacggtcccggcgacttcatcgatccgctcggcggc
ctgaccgcgctgcggcaacgaattctcgacacccccgcggccccggaggtgtccttcggc
gacgacccgctgcgcatgctgcgggctgcgcgcttcgcctcccagttgcagttcgacgtc
tccgaccgggtccgccgcgcaattgtggagatggcgccccagctcggccggatcacggtc
gagcgggtggccgtggaactggacaagatgctgctgggggtggaccccgtcgcgggcatc
gacctgatggtccagaccggcatgggcgaggtggtgctgcccgagatcggcggcatgcag
atggccatcgacgagcaccatcagcacaaggacgtctaccagcattcgctgacggttctg
cgccaggcgatggcgttggaagaaccgggcgaacgcgacctggttttgcggtgggccgcg
ctgctgcacgacatcggcaagccggccacccggcgccacgaatccgacggcggtgtcagc
ttccaccaccatgaggtggtcggcgccaagatggtccgcaagcggatgcgcgcgctgaag
tactccaagcagatggtcgacgacgtgtcccagttggtgtacctgcacttgcgattccac
ggttacggcgacggcaagtggaccgattcggcggtgcgccgctatgtcgccgacgccggc
ccgttgctgccgaggctgcacaagttggtccgcgccgactgcaccacccgcaacaagcgg
cgggcggcccggctgcaggccaactacgacgaactcgagacgcggatcgccgagctggcc
gccaaggaagacctccagcgggtgcgtccggatctggacggcaacgagatcatgcggttg
ctcgacatcccgcccggcccgcaggtggggcaggcgtggaacttcctcaaggaactgcgc
ctggaccgcgggccgctggatcacgacgaggccgtggccgaattgctggcctggtggaac
gcgaaggaccagcccggcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system