KEGG   Mizuhopecten yessoensis (Yesso scallop): 110446981
Entry
110446981         CDS       T05079                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110446981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myi03021]
    110446981
   03036 Chromosome and associated proteins [BR:myi03036]
    110446981
Transcription machinery [BR:myi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110446981
   Coactivators
    SAGA/TFTC/STAGA complex
     110446981
Chromosome and associated proteins [BR:myi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110446981
    STAGA complex
     110446981
    TFTC complex
     110446981
    SAGA complex
     110446981
    SLIK complex
     110446981
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 WD40_like RMC1_N WDR54 Nup160
Other DBs
NCBI-GeneID: 110446981
NCBI-ProteinID: XP_021348014
Position
Unknown
AA seq 605 aa
MKRIRYEQIHSSVHQYLKRRQYSDHEVIEKKEHRWVHDVKDMALKSSASGETTTENILLY
SSISGDTTVCEQQFSRLKTYLNEAIDPYKDELTTIVYPLFVHIYLQLMYNGHKAPAHKFY
SRHVKLFENPDELVVMEALNKLYTRTEVISCKEAMEFREHKYKVCLSQEALDYLMKYLKV
DDNMMLLQIFNQHLKVEVLKEDQHVLDLKESASDKHESGASEKKRPTDIVRLLQQCIKQV
REGPPCMSSICFYTFLNAYQGLCTVDISPDRTLLSAGFEDSTVKLWSITPGLIQSTKTTT
DPSKLYLSADFWTSESSCEDEEDEEAETEQNKEEKKPLYREVATLRGHNGSVYKTSFCAN
SKALLSCSEDGSVRLWDMKTHTNKVCYRGHNYPVWDIDTSSTGNYFASASKDCTAKLWET
DRTFPLRSFIGHSYDVDCVKFHPNSNYLATGSSDRTVRLWSLQDGKSVRLMQGHRSSVLA
LAFSPNGQYLASAGDDRRIRVWDLTSGNMFKELKGHTDTIHCLTFNRDSTLLASGGLDCC
IKIWDIRKGVSMSSSNNNSNSNNNNNNPPDANISPEQLGSFPTKSAIVAYLKFAQHNLLY
AAGSI
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaagcgcatacgttacgagcaaatacactcgtctgtacaccagtatcttaagaggaga
cagtattcggaccatgaagtgattgagaagaaggagcacagatgggtacatgatgtaaag
gacatggctctaaagagttcagcttcaggggagacaacaacggagaatatcttgttgtat
agcagcatatcaggggacacaactgtttgtgagcaacagttttcacgattgaagacatac
ctaaacgaggccattgacccttacaaggatgagctgacaacgatagtataccccctgttt
gtacatatttacctccagcttatgtacaatggacacaaggcaccagcacacaaattctac
agtcgccatgtgaagctgtttgaaaaccctgatgagctggtcgtgatggaggctctaaac
aaactgtacacgcgtacagaggtcatcagttgtaaggaggccatggagttcagagaacac
aagtataaagtatgtctgtcacaagaggctttggactacctgatgaaatatctcaaggtt
gatgataatatgatgctattacaaattttcaatcagcatttgaaagtggaagtattaaag
gaggaccaacatgttctcgacctgaaggagagcgcgagcgacaaacatgagtctggggca
agcgagaagaaacgccccacagatattgtcaggctgctacaacaatgtatcaaacaagta
cgcgaaggaccaccctgtatgtcttcaatatgtttctacaccttcctcaacgcctatcag
gggctatgtacggtggacatatcgccagacaggacacttctgagtgctgggtttgaggac
tccaccgtaaagctgtggagcatcactccaggtctgatacagtctaccaaaacaacgaca
gatccatccaagctctacctgtctgccgacttctggacctcagagtcctcgtgtgaggac
gaggaggatgaggaggctgagactgagcagaacaaggaagaaaagaagcccctgtaccgt
gaggtggcgacactgagaggtcacaacggttctgtttacaagacatccttctgtgctaac
tctaaagctttactctcgtgttcagaagatggatcagtacgtctttgggacatgaagact
cataccaacaaagtgtgctatagaggtcacaattaccctgtgtgggacatagacactagt
tcaactgggaattatttcgcctcggcatccaaggactgcacagcgaaattatgggagacg
gaccggacttttccattgaggtcattcattggtcactcatatgatgtggattgtgtcaag
tttcatcccaactctaactacctggcgacggggtccagtgaccggactgtccgactgtgg
agtctccaggatgggaagtccgtccgtctgatgcagggacaccggagctcggtccttgcc
ctagctttctcacccaatggacagtacctggcctccgctggtgatgatcgtaggattcgg
gtctgggatctcacctccggaaacatgttcaaggaactgaaaggccacacagataccata
cactgcctcaccttcaacagagacagcaccctgttagcatcaggtggccttgactgttgt
ataaagatctgggacatcagaaagggcgtcagtatgagcagcagcaacaacaacagcaac
agcaacaacaacaacaacaacccaccagatgcaaatatttcaccagaacagttaggatcg
tttccaacgaaatccgcaatagtggcatatttaaagtttgcccaacacaatctcctgtac
gctgcaggcagcatttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (61)   

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