KEGG T05079: 110455662

Mizuhopecten yessoensis (Yesso scallop): 110455662

Entry

110455662         CDS       T05079

Name

(RefSeq) low-density lipoprotein receptor-like isoform X1

K20053

very low-density lipoprotein receptor

Organism

myi Mizuhopecten yessoensis (Yesso scallop)

Brite

KEGG Orthology (KO) [BR:myi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:myi04131]
    110455662
Membrane trafficking [BR:myi04131]
Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    110455662

SSDB

Motif

Pfam:

Ldl_recept_a Ldl_recept_b SGL DUF5050

Other DBs

NCBI-GeneID:

110455662

NCBI-ProteinID:

XP_021361588

Position

Unknown

AA seq 819 aa
MLHPRVINITYTSIYIHCRPVNMAVGTYLLTAVFFSYFIAISYTQPVDSSKACKPGMVLC
ANTTKCIPRKWVCDGDADCPNKTDEVNCEPTTCGPGLTLCANSSQCISSVWVCDGDRDCI
SGSDEANCDHHNKTCSPKEFLCKSSQKCIPSKWQCDGGMDCSDNSDEINCSSITCSPTQF
MCKTSQKCINMRWRCDGDDDCGDNSDEENCTNKTCSDQEFMCKSNSMCIHKTWRCDGAMD
CVDHSDEQNCTTKATCSADQFECDKKTCIDGAKECDGIKDCFNGRDEAECLPGDVRVLLA
DRHSLKLVTLSSDTRKALSHRMSPSRTTYNMVGVDYDYGEGYVFWTDVGQIGIYSARFLN
SSSTITDERTVVSRNIRTADGLAVDWINNLIYWTDTGRNEISVTDYNGTLRKTLFQFNLD
EPRAIVVDPLTGWMYWTDWGTPAKIERAGMNGQQRETIVSANLTWPNGLTLDKKDGRLYW
IDSKFKMVESSQTDGTDRKVVSKGKVNHGFGITTSEFAIYITSWVDKGITGLTKSDGRVT
RFTNEVTDSITQPMGLKLYSNTLQKQKASVCYTNEFECKYLCLPGPAKPPSTEVRYICAC
PDGSTCDIGSTKSGPGSSTTTPMTTTAATTTTATAATTAATSDPKTTDVTNLSTSGTTTT
QKAVTSTIIPTTSQAPGCRSDQVPCDDSSSTCIPLTWKCDGKQDCLDGSDEKTCPTSGAC
PAGYFECSNGFCIPDKWMCDGEIDCWNESDEVGCSARCQKGQSYCRTQDKCIAQTWVCDG
DYDCLGGTDEYNCKTSTSAAQDWNTNPLYDGLLFNFLVN

NT seq 2460 nt +upstreamnt +downstreamnt
atgctccatccccgagttataaatattacatacacatctatttatatacactgtagacca
gtcaacatggctgttgggacgtaccttcttaccgctgtattcttctcttatttcatcgct
atttcctacactcagccagtagattcaagcaaggcgtgtaaaccaggaatggtgctctgc
gcaaataccacgaagtgtatcccccggaagtgggtgtgtgatggtgatgcagactgcccc
aacaagacagacgaagttaactgtgaaccaaccacctgcggtccgggcttgaccctgtgt
gccaattcgtcccaatgtatttcgtcggtatgggtctgtgacggtgatagagactgcata
tctggatcggacgaggccaattgtgatcatcataataaaacatgttcccccaaagagttc
ttgtgtaaatcctctcaaaagtgcattccaagtaaatggcaatgcgacggaggaatggat
tgttcagataactctgacgaaatcaactgttcaagtataacctgctcaccaacacagttc
atgtgtaaaaccagtcaaaagtgcatcaacatgaggtggagatgtgacggagacgacgat
tgtggagataattctgacgaagagaactgtacaaacaaaacctgctcagaccaagagttt
atgtgtaaatcaaacagcatgtgtatccacaaaacttggcgatgtgatggggctatggac
tgcgtagatcactcagacgagcaaaactgtacaacgaaggcaacatgttctgccgatcag
tttgaatgtgacaaaaaaacctgcattgatggtgcgaaggaatgtgacggcatcaaagat
tgcttcaacggaagagatgaagcagagtgtttacctggagatgtacgagttctcctggca
gacagacacagcctcaagttggttactctatccagtgatactcgtaaagcattgtcccat
cggatgtctccttcccgaaccacatacaatatggttggcgttgactacgactatggagag
ggatatgtgttctggacggatgttggtcaaattggcatttacagtgcaagatttctgaat
tcctcgtctaccattacggacgaacggaccgtcgtgtcccgtaacataaggacagcggac
ggcctcgctgttgactggataaacaatctgatatactggacagacacaggccggaatgag
atatcggtcaccgactacaacggaactctgaggaaaaccctgtttcaattcaacctagat
gaaccaagagctatagtagtggatccactgacagggtggatgtattggacagattggggc
accccagctaagatagaaagggccggaatgaacggacagcaaagggagacaatcgtatca
gccaacttgacatggccaaatggccttacgttagataagaaagacgggcgactgtactgg
attgattccaaattcaaaatggtggagtcttctcaaactgatggaactgacagaaaggtt
gtcagcaaaggaaaagttaaccatggtttcggtataacgacgtcggagttcgccatttac
attacgtcctgggtagacaaaggcatcaccggattaactaaatcagacggtcgagtgaca
cgcttcacaaacgaggtgacggattctattacgcaaccaatgggattaaaactatacagc
aatacattgcaaaagcaaaaggcaagtgtatgctacactaacgagtttgaatgcaagtac
ctttgtctacctggccccgcgaagccaccatcaactgaggttcggtacatttgcgcatgc
ccagacgggagcacgtgtgacataggctcgacaaaaagcggacccggaagtagtacaacc
acgccaatgacaacaactgcagctacaacaacaacagcaacagcagcaacaacagcagcg
acaagcgatccaaagactacagatgtcacaaatctctccacttccggtactactactacg
cagaaagcggtgacgtcaacaataattccaaccacatcccaagctccagggtgcaggtct
gatcaggtgccatgcgacgacagttcgtccacgtgtataccacttacgtggaaatgcgat
ggtaaacaggactgcctggacgggtcagacgaaaagacttgtccaacaagcggcgcatgc
ccagcggggtatttcgagtgtagtaacggattttgtatcccggataagtggatgtgtgat
ggcgagattgactgctggaacgagtcggacgaagtcggctgttctgcccggtgccagaaa
ggtcagtcttattgccgaacccaagacaagtgtatagctcagacctgggtgtgtgacggc
gactacgactgtttgggcggcacagacgaatacaactgcaagacttcaacatcagcggca
caggactggaacaccaatcctctttatgatggacttttatttaattttcttgttaattaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (4)   
   Pfam (4)   
All databases (102)   

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